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HAMAP annotation rule: MF_00462
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General rule information

Accession MF_00462
Dates 15-OCT-2001 (Created)
2-DEC-2010 (Last updated, Version 30)
Data class Protein
Predictors HAMAP; MF_00462; [distribution of match scores in UniProtKB];[seed alignment for MF_00462]
Names RnfD


Propagated annotation

Identifier, protein and gene names
Identifier RNFD

case <Property:NITROGEN_FIXATION>
Protein name
RecName: Full=Electron transport complex protein rnfD;
AltName: Full=Nitrogen fixation protein rnfD;

else
Protein name
RecName: Full=Electron transport complex protein rnfD;
end case

Gene name rnfD
Comments

case <Property:NITROGEN_FIXATION>
FUNCTION: Required for nitrogen fixation. May be part of a membrane complex functioning as an intermediate in the electron transport to nitrogenase (By similarity).

else
FUNCTION: May be part of a membrane complex involved in electron transport (By similarity).
end case

SUBUNIT: Composed of at least six subunits; rnfA, rnfB, rnfC, rnfD, rnfE and rnfG (By similarity).

case not defined <Property:Membrane> or <Property:Membrane=1>
SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein (Potential).

else case <Property:Membrane=2>
SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein (Potential).
end case

SIMILARITY: Belongs to the nqrB/rnfD family.
Cross-references
Pfam PF03116; NQR2_RnfD_RnfE; 1;
General Transmembrane; -; 7-10; trigger=Yes;
Keywords

case <Property:NITROGEN_FIXATION>
Nitrogen fixation.
end case

Transport, Electron transport, Membrane, Cell membrane, Transmembrane.

case defined <Property:Membrane> and <Property:Membrane=2>
Cell inner membrane.
end case

Transmembrane helix.
Gene Ontology
GO:0055114; Biological process: oxidation-reduction process.

case <Property:NITROGEN_FIXATION>
GO:0009399; Biological process: nitrogen fixation.
end case

GO:0005886; Cellular component: plasma membrane.


Additional information

Size range: 332-358 amino acids
Related UniRules: MF_00426 (NQRB)
Template: Q52715 (RNFD_RHOCA)
Scope: Bacteria
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None

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UniProtKB rule member sequences