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HAMAP annotation rule: MF_00531
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General rule information

Accession MF_00531
Dates 21-JAN-2002 (Created)
10-OCT-2011 (Last updated, Version 33)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_00531_B; [distribution of match scores in UniProtKB];[seed alignment for MF_00531_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_00531_A; [distribution of match scores in UniProtKB];[seed alignment for MF_00531_A]
end case

Names Ribosomal_S19


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RS19
Protein name
RecName: Full=30S ribosomal protein S19;
Gene name rpsS

else case <OC:Cyanobacteria>
Identifier RS19
Protein name
RecName: Full=30S ribosomal protein S19;
Gene name rpsS, rps19

else case <OC:Archaea>
Identifier RS19
Protein name
RecName: Full=30S ribosomal protein S19P;
Gene name rps19p

else case <OG:Chloroplast>
Identifier RR19
Protein name
RecName: Full=30S ribosomal protein S19, chloroplastic;
Gene name rps19
end case

Comments
FUNCTION: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity).

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein S19P family.
Cross-references
Pfam PF00203; Ribosomal_S19; 1;
PRINTS PR00975; RIBOSOMALS19; 1;
TIGRFAMs TIGR01050; RpsS_bact; 1;
PROSITE PS00323; RIBOSOMAL_S19; 1;
Keywords
Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding.
Gene Ontology
GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria> or <OG:Chloroplast>
Size range: 87-99 amino acids
end case


case <OC:Archaea>
Size range: 131-162 amino acids
end case

Related UniRules: None
Template: P0A7U3 (RS19_ECOLI); Q5SHP2 (RS19_THET8): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: <Unknown>; Cter: None
Duplicate: in BARBK, LEPBL
Plasmid encoded: None
Comments: Unknown N-terminal domain in Aquificales; AQUAE and AQUPY are longest. CALMQ has an N-terminal extension not taken into account in size range.

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UniProtKB rule member sequences