HAMAP rule MF_00657
General rule information
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Accession | MF_00657 |
Dates | 15-JUN-2003 (Created)
17-FEB-2023 (Last updated, Version 40) |
Name | Hydroxyl_YbiX |
Scope(s) |
Bacteria Cyanobacteriota Pseudomonadota |
Template(s) | None (); [ Recover all ] |
Triggered by |
HAMAP; MF_00657 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
Identifier | YBIX |
Protein name | RecName: Full=PKHD-type hydroxylase YbiX; EC=1.14.11.-; |
Gene name | Name=ybiX; |
else | |
Identifier | Ynnn |
Protein name | RecName: Full=PKHD-type hydroxylase EC=1.14.11.-; |
end case |
Comments
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case <FTGroup:1> | |
COFACTOR | Name=Fe(2+); Xref=ChEBI:CHEBI:29033; Note=Binds 1 Fe(2+) ion per subunit.; |
COFACTOR | Name=L-ascorbate; Xref=ChEBI:CHEBI:38290; |
end case |
Keywords
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Oxidoreductase | |
Dioxygenase | |
case <FTGroup:1> | |
Metal-binding | |
Iron | |
Vitamin C | |
end case |
Gene Ontology
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case <FTGroup:1> | |
GO:0005506; Molecular function:iron ion binding | |
end case | |
GO:0016706; Molecular function:2-oxoglutarate-dependent dioxygenase activity |
Cross-references
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Features
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From: YBIX_ECOLI (P75779) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
BINDING | 96 | 96 | /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875" |
H | 1 | |||||||
BINDING | 98 | 98 | /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875" |
D | 1 | |||||||
BINDING | 158 | 158 | /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875" |
H | 1 | |||||||
BINDING | 168 | 168 | /ligand="2-oxoglutarate" /ligand_id="ChEBI:CHEBI:16810" |
R |
Additional information
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Size range | 218-259 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |