HAMAP rule MF_00736
General rule information
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| Accession | MF_00736 |
| Dates | 25-NOV-2003 (Created)
22-SEP-2023 (Last updated, Version 33) |
| Name | Ribosomal_uL11 |
| Scope(s) |
Bacteria Archaea Plastid |
| Template(s) | P0A7J7 (RL11_ECOLI); Q5SLP6 (RL11_THET8); [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria> or <OC:Archaea> or <OG:Chloroplast>
HAMAP; MF_00736 (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
| Identifier | RL11 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL11; |
| Gene name | Name=rplK; |
| else case <OC:Cyanobacteriota> | |
| Identifier | RL11 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL11; |
| Gene name | Name=rplK; Synonyms=rpl11; |
| else case <OC:Archaea> | |
| Identifier | RL11 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL11; |
| Gene name | Name=rpl11; |
| else case <OG:Chloroplast> | |
| Identifier | RK11 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL11c; |
| Gene name | Name=rpl11; |
| end case | |
Comments
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| FUNCTION | Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. |
| SUBUNIT | Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. |
| case <OG:Chloroplast> | |
| SUBCELLULAR LOCATION | Plastid, chloroplast. |
| end case | |
| case <OC:Bacteria> | |
| PTM | One or more lysine residues are methylated. |
| end case | |
| SIMILARITY | Belongs to the universal ribosomal protein uL11 family. |
Keywords
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| Ribonucleoprotein | |
| Ribosomal protein | |
| RNA-binding | |
| rRNA-binding | |
| case <OC:Bacteria> | |
| Methylation | |
| end case | |
Gene Ontology
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| GO:0070180; Molecular function:large ribosomal subunit rRNA binding | |
| GO:0006412; Biological process:translation | |
| case <OG:Chloroplast> | |
| GO:0009507; Cellular component:chloroplast | |
| end case | |
Cross-references
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| Pfam | PF00298; Ribosomal_L11; 1; |
| Pfam | PF03946; Ribosomal_L11_N; 1; |
| NCBIfam | TIGR01632; L11_bact; 1; |
| PROSITE | PS00359; RIBOSOMAL_L11; 1; |
Features
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Additional information
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| Size range | 156-170 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |
| Comments | Between 2 and 4 L12 dimers bind to L10 to form the stalk extension, depending on the length of the C-terminus of L10. See PubMed:20467040. |