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HAMAP annotation rule: MF_01329
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General rule information

Accession MF_01329
Dates 8-APR-2004 (Created)
19-JUL-2011 (Last updated, Version 29)
Data class Protein
Predictors HAMAP; MF_01329; [distribution of match scores in UniProtKB];[seed alignment for MF_01329]
Names PSII_Ycf12


Propagated annotation

Identifier, protein and gene names
Identifier YCF12
Protein name
RecName: Full=Photosystem II reaction center protein ycf12;
Gene name ycf12
Comments
FUNCTION: A core subunit of photosystem II (PSII) (By similarity).

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane; Single-pass membrane protein (By similarity).

else case <OC:Gloeobacter>
SUBCELLULAR LOCATION: Cell inner membrane; Single-pass membrane protein (By similarity).

else
SUBCELLULAR LOCATION: Cellular thylakoid membrane; Single-pass membrane protein (By similarity).
end case

SIMILARITY: Belongs to the ycf12 family.
Cross-references
Pfam PF05969; PSII_Ycf12; 1;
General Transmembrane; -; 1; trigger=Yes;
Keywords
Membrane, Photosynthesis, Photosystem II.

case <OC:Gloeobacter>
Cell membrane, Cell inner membrane.

else
Thylakoid.
end case

Transmembrane, Transmembrane helix.
Gene Ontology

case <OG:Chloroplast>
GO:0009535; Cellular component: chloroplast thylakoid membrane.

else case <OC:Gloeobacter>
GO:0005886; Cellular component: plasma membrane.

else
GO:0042651; Cellular component: thylakoid membrane.
end case



Additional information

Size range: 31-47 amino acids
Related UniRules: None
Template: Q8DJI1 (YCF12_THEEB)
Scope: Bacteria; Cyanobacteria
Plastid
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: None
Comments: Seems not to exist in angiosperms. Does not seem to exist in Prochlorococcus.

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UniProtKB rule member sequences