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HAMAP annotation rule: MF_01342
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General rule information

Accession MF_01342
Dates 24-NOV-2005 (Created)
25-NOV-2009 (Last updated, Version 14)
Data class Protein
Predictors HAMAP; MF_01342; [distribution of match scores in UniProtKB];[seed alignment for MF_01342]
Names Ribosomal_L16


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RL16
Protein name
RecName: Full=50S ribosomal protein L16;
Gene name rplP

else case <OC:Cyanobacteria>
Identifier RL16
Protein name
RecName: Full=50S ribosomal protein L16;
Gene name rplP, rpl16

else case <OG:Chloroplast>
Identifier RK16
Protein name
RecName: Full=50S ribosomal protein L16, chloroplastic;
Gene name rpl16
end case

Comments

case <OC:Bacteria>
FUNCTION: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (By similarity).
end case

SUBUNIT: Part of the 50S ribosomal subunit (By similarity).

case <OG:Chloroplast>
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein L16P family.
Cross-references
PROSITE PS00586; RIBOSOMAL_L16_1; 1;
PS00701; RIBOSOMAL_L16_2; 1;
Pfam PF00252; Ribosomal_L16; 1;
PRINTS PR00060; RIBOSOMALL16; 1;
TIGRFAMs TIGR01164; rplP_bact; 1;
Keywords
Ribonucleoprotein, Ribosomal protein.

case <OC:Bacteria>
RNA-binding, rRNA-binding, tRNA-binding.
end case

Gene Ontology

case <OC:Bacteria>
GO:0019843; Molecular function: rRNA binding.
end case

GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information

Size range: 133-182 amino acids
Related UniRules: None
Template: Q9RXJ5 (RL16_DEIRA); P0ADY7 (RL16_ECOLI); P60489 (RL16_THET8): [Recover all]
Scope: Bacteria
Plastid
Fusion: Nter: None; Cter: None
Duplicate: in BARBK, LEPBL
Plasmid encoded: None
Comments: CARRP is annotated as atypical due to a weak match against profile.

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UniProtKB rule member sequences