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HAMAP rule MF_01345

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General rule information [?]

Accession MF_01345
Dates 20-MAR-2006 (Created)
22-SEP-2023 (Last updated, Version 27)
Name Ribosomal_uS17
Scope(s) Bacteria
Archaea
Plastid
Template(s) P0AG63 (RS17_ECOLI); P0DOY7 (RS17_THET8); [ Recover all ]
Triggered by
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_01345_B (Get profile general information and statistics)
end case
case c? <OC:Archaea>
HAMAP; MF_01345_A (Get profile general information and statistics)
end case

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier RS17
Protein name RecName: Full=Small ribosomal subunit protein uS17;
Gene name Name=rpsQ;
else case <OC:Cyanobacteriota>
Identifier RS17
Protein name RecName: Full=Small ribosomal subunit protein uS17;
Gene name Name=rpsQ; Synonyms=rps17;
else case <OC:Archaea>
Identifier RS17
Protein name RecName: Full=Small ribosomal subunit protein uS17;
Gene name Name=rps17;
else case <OG:Chloroplast>
Identifier RR17
Protein name RecName: Full=Small ribosomal subunit protein uS17c;
Gene name Name=rps17;
end case

Comments [?]

FUNCTIONOne of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
SUBUNITPart of the 30S ribosomal subunit.
case <OG:Chloroplast>
SUBCELLULAR LOCATIONPlastid, chloroplast.
end case
SIMILARITYBelongs to the universal ribosomal protein uS17 family.

Keywords [?]


Gene Ontology [?]

GO:0019843; Molecular function:rRNA binding
GO:0006412; Biological process:translation
case <OG:Chloroplast>
GO:0009507; Cellular component:chloroplast
end case

Cross-references [?]

PROSITE PS00056; RIBOSOMAL_S17; 1;
Pfam PF00366; Ribosomal_S17; 1;
PRINTS PR00973; RIBOSOMALS17; 1;
NCBIfam TIGR03630; uS17_arch; 0-1;
NCBIfam TIGR03635; uS17_bact; 0-1;

Features [?]


Additional information [?]

Size range 106-123 amino acids
Related rules None
Fusion Nter: None Cter: <Unknown>
Comments Second copy fused to an unknown domain in METAC.



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