HAMAP rule MF_01345
General rule information
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Accession | MF_01345 |
Dates | 20-MAR-2006 (Created)
22-SEP-2023 (Last updated, Version 27) |
Name | Ribosomal_uS17 |
Scope(s) |
Bacteria Archaea Plastid |
Template(s) | P0AG63 (RS17_ECOLI); P0DOY7 (RS17_THET8); [ Recover all ] |
Triggered by |
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_01345_B (Get profile general information and statistics) end case
case c? <OC:Archaea>
HAMAP; MF_01345_A (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
Identifier | RS17 |
Protein name | RecName: Full=Small ribosomal subunit protein uS17; |
Gene name | Name=rpsQ; |
else case <OC:Cyanobacteriota> | |
Identifier | RS17 |
Protein name | RecName: Full=Small ribosomal subunit protein uS17; |
Gene name | Name=rpsQ; Synonyms=rps17; |
else case <OC:Archaea> | |
Identifier | RS17 |
Protein name | RecName: Full=Small ribosomal subunit protein uS17; |
Gene name | Name=rps17; |
else case <OG:Chloroplast> | |
Identifier | RR17 |
Protein name | RecName: Full=Small ribosomal subunit protein uS17c; |
Gene name | Name=rps17; |
end case |
Comments
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FUNCTION | One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. |
SUBUNIT | Part of the 30S ribosomal subunit. |
case <OG:Chloroplast> | |
SUBCELLULAR LOCATION | Plastid, chloroplast. |
end case | |
SIMILARITY | Belongs to the universal ribosomal protein uS17 family. |
Keywords
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Gene Ontology
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GO:0019843; Molecular function:rRNA binding | |
GO:0006412; Biological process:translation | |
case <OG:Chloroplast> | |
GO:0009507; Cellular component:chloroplast | |
end case |
Cross-references
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PROSITE | PS00056; RIBOSOMAL_S17; 1; |
Pfam | PF00366; Ribosomal_S17; 1; |
PRINTS | PR00973; RIBOSOMALS17; 1; |
NCBIfam | TIGR03630; uS17_arch; 0-1; |
NCBIfam | TIGR03635; uS17_bact; 0-1; |
Features
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Additional information
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Size range | 106-123 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: <Unknown> |
Comments | Second copy fused to an unknown domain in METAC. |