HAMAP rule MF_01479
General rule information
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Accession | MF_01479 |
Dates | 8-OCT-2012 (Created)
13-JAN-2023 (Last updated, Version 16) |
Name | WhiB |
Scope(s) |
Bacteria Actinomycetota |
Template(s) | P9WF43 (WHIB1_MYCTU); P9WF41 (WHIB3_MYCTU); P9WF39 (WHIB4_MYCTU); Q7AKI9 (WHID_STRCO); [ Recover all ] |
Triggered by |
HAMAP; MF_01479 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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Identifier | WHIB |
Protein name | RecName: Full=Transcriptional regulator WhiB; |
Gene name | Name=whiB; |
Comments
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FUNCTION | Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. |
COFACTOR | Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Note=Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.; |
SUBCELLULAR LOCATION | Cytoplasm. |
PTM | The Fe-S cluster can be nitrosylated by nitric oxide (NO). |
PTM | Upon Fe-S cluster removal intramolecular disulfide bonds are formed. |
SIMILARITY | Belongs to the WhiB family. |
Keywords
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case <FTGroup:1> | |
4Fe-4S | |
Iron | |
Iron-sulfur | |
Metal-binding | |
end case | |
Cytoplasm | |
Disulfide bond | |
DNA-binding | |
Transcription | |
Transcription regulation |
Gene Ontology
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GO:0051539; Molecular function:4 iron, 4 sulfur cluster binding |
GO:0005737; Cellular component:cytoplasm |
GO:0006355; Biological process:regulation of DNA-templated transcription |
GO:0003677; Molecular function:DNA binding |
GO:0035731; Molecular function:dinitrosyl-iron complex binding |
Cross-references
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Pfam | PF02467; Whib; 1; |
Features
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From: WHIB1_MYCTU (P9WF43) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
BINDING | 9 | 9 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
BINDING | 37 | 37 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
BINDING | 40 | 40 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
BINDING | 46 | 46 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 |
Additional information
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Size range | 76-306 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |