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HAMAP rule MF_01587

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General rule information [?]

Accession MF_01587
Dates 15-NOV-2007 (Created)
28-APR-2022 (Last updated, Version 14)
Name DNA_ligase_B
Scope(s) Bacteria
Gammaproteobacteria
Template(s) P25772 (LIGB_ECOLI); [ Recover all ]
Triggered by HAMAP; MF_01587 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier LIGB
Protein name RecName: Full=DNA ligase B;
                 EC=6.5.1.2;
AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)] B;
Gene name Name=ligB;

Comments [?]

FUNCTIONCatalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.
CATALYTIC ACTIVITY Reaction=NAD(+) + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho- (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP + beta- nicotinamide D-nucleotide.; EC=6.5.1.2;
SIMILARITYBelongs to the NAD-dependent DNA ligase family. LigB subfamily.

Keywords [?]


Gene Ontology [?]

GO:0003911; Molecular function:DNA ligase (NAD+) activity
GO:0006259; Biological process:DNA metabolic process

Cross-references [?]

PROSITE PS01055; DNA_LIGASE_N1; 1;
PROSITE PS01056; DNA_LIGASE_N2; 1;
Pfam PF01653; DNA_ligase_aden; 1;
Pfam PF03120; DNA_ligase_OB; 1;

Features [?]

From: LIGB_ECOLI (P25772)
Key From To Description Tag Condition FTGroup
ACT_SITE 124 124 /note="N6-AMP-lysine intermediate" K

Additional information [?]

Size range 554-629 amino acids
Related rules MF_01588
Fusion Nter: None Cter: None



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