HAMAP rule MF_01587
General rule information
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Accession | MF_01587 |
Dates | 15-NOV-2007 (Created)
28-APR-2022 (Last updated, Version 14) |
Name | DNA_ligase_B |
Scope(s) |
Bacteria Gammaproteobacteria |
Template(s) | P25772 (LIGB_ECOLI); [ Recover all ] |
Triggered by |
HAMAP; MF_01587 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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Identifier | LIGB |
Protein name | RecName: Full=DNA ligase B; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)] B; |
Gene name | Name=ligB; |
Comments
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FUNCTION | Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. |
CATALYTIC ACTIVITY | Reaction=NAD(+) + (deoxyribonucleotide)n-3'-hydroxyl + 5'-phospho- (deoxyribonucleotide)m = (deoxyribonucleotide)n+m + AMP + beta- nicotinamide D-nucleotide.; EC=6.5.1.2; |
SIMILARITY | Belongs to the NAD-dependent DNA ligase family. LigB subfamily. |
Keywords
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Gene Ontology
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GO:0003911; Molecular function:DNA ligase (NAD+) activity |
GO:0006259; Biological process:DNA metabolic process |
Cross-references
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PROSITE | PS01055; DNA_LIGASE_N1; 1; |
PROSITE | PS01056; DNA_LIGASE_N2; 1; |
Pfam | PF01653; DNA_ligase_aden; 1; |
Pfam | PF03120; DNA_ligase_OB; 1; |
Features
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From: LIGB_ECOLI (P25772) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
ACT_SITE | 124 | 124 | /note="N6-AMP-lysine intermediate" | K |
Additional information
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Size range | 554-629 amino acids |
Related rules |
MF_01588 |
Fusion | Nter: None Cter: None |