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SPARQL example query

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1: Select all hamap rules

PREFIX sh: <http://www.w3.org/ns/shacl#> SELECT ?rule WHERE { ?rule sh:construct ?query . }Use

3: Select all hamap rules that deal with Catalytic Activity

PREFIX sh: <http://www.w3.org/ns/shacl#> SELECT ?rule ?query WHERE { ?rule sh:construct ?query . FILTER (CONTAINS(?query, 'Catalytic_Activity_Annotation')) }Use

4: Select all hamap rules that annotate a Rhea reaction with an EC enzyme class

PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> PREFIX sp: <http://spinrdf.org/sp#> PREFIX up: <http://purl.uniprot.org/core/> SELECT ?rule ?enzymeClass WHERE { ?rule a sp:Construct ; sp:templates/rdf:rest*/rdf:first ?annotationsToAdd . ?annotationsToAdd sp:predicate up:enzymeClass ; sp:object ?enzymeClass . }Use
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