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HAMAP rule MF_00009

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General rule information [?]

Accession MF_00009
Dates 1-JUN-2001 (Created)
1-JUN-2023 (Last updated, Version 33)
Name Endoribonucl_YbeY
Scope(s) Bacteria
Template(s) P71335 (YBEY_HAEIN); Q9X1J7 (YBEY_THEMA); O67367 (YBEY_AQUAE); P0A898 (YBEY_ECOLI); [ Recover all ]
Triggered by HAMAP; MF_00009 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier YBEY
Protein name RecName: Full=Endoribonuclease YbeY;
Gene name Name=ybeY;

Comments [?]

FUNCTIONSingle strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
case <FTGroup:1>
COFACTOR Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion.;
end case
SIMILARITYBelongs to the endoribonuclease YbeY family.

Keywords [?]

Gene Ontology [?]

GO:0004521; Molecular function:RNA endonuclease activity
GO:0042254; Biological process:ribosome biogenesis
GO:0006364; Biological process:rRNA processing
case <FTGroup:1>
GO:0008270; Molecular function:zinc ion binding
end case
GO:0005737; Cellular component:cytoplasm

Cross-references [?]

Pfam PF02130; UPF0054; 1;
NCBIfam TIGR00043; TIGR00043; 1;
PROSITE PS01306; UPF0054; 1;

Features [?]

From: YBEY_HAEIN (P71335)
Key From To Description Tag Condition FTGroup
BINDING 114 114 /ligand="Zn(2+)"
H 1
BINDING 118 118 /ligand="Zn(2+)"
H 1
BINDING 124 124 /ligand="Zn(2+)"
[HD] 1

Additional information [?]

Size range 101-280 amino acids
Related rules None
Fusion Nter: <Unknown> Cter: None
Comments Fused with an unknown domain in some species.

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