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Reference proteomes: bacteria

To retrieve information from a particular organism (description, genome reference paper(s), taxonomy or UniProtKB entries), click on the UniProtKB proteome identifier.


Statistics
UniProtKB
Number of entries in UniProtKB
HAMAP coverage
Species Species code proteome identifier All Swiss-Prot TrEMBL in UniProtKB
Abditibacterium utsteinense     /     UP000237684 3182 0 3182
   14%
Abiotrophia defectiva ATCC 49176     /     UP000019050 1943 0 1943
   19%
Absiella dolichum DSM 3991     /     UP000004090 2311 0 2311
   16%
Absiella sp. AM09-45     /     UP000262570 4075 0 4075
   11%
Abyssibacter profundi     /     UP000251800 3331 0 3331
   17%
Abyssicoccus albus     /     UP000277108 1737 0 1737
   25%
Acaryochloris marina (strain MBIC 11017) ACAM1 UP000000268 8230 322 7908
   8%
Acaryochloris sp. RCC1774     /     UP000248857 5409 0 5409
   11%
Accumulibacter phosphatis (strain UW-1) ACCPU UP000001619 4462 1 4461
   15%
Acetanaerobacterium elongatum     /     UP000199182 2758 0 2758
   15%
Acetatifactor muris     /     UP000236311 5687 0 5687
   8%
Acetitomaculum ruminis DSM 5522     /     UP000198838 2632 0 2632
   16%
Acetivibrio ethanolgignens     /     UP000054874 3375 0 3375
   13%
Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654) (Clostridium ... ACESD UP000007041 2572 24 2548
   19%
Acetobacter aceti NBRC 14818     /     UP000032677 3146 0 3146
   16%
Acetobacter cerevisiae     /     UP000075473 2662 0 2662
   19%
Acetobacter indonesiensis 5H-1     /     UP000032673 2977 0 2977
   17%
Acetobacter orientalis 21F-2     /     UP000032670 2561 0 2561
   20%
Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) ACEP3 UP000000948 2951 5 2946
   17%
Acetobacter sp. DmW_043     /     UP000196359 2062 0 2062
   23%
Acetobacter sp. DsW_54     /     UP000194822 2200 0 2200
   22%
Acetobacter tropicalis NBRC 101654     /     UP000004319 3538 0 3538
   14%
Acetobacteraceae bacterium     /     UP000297111 1743 0 1743
   21%
Acetobacteraceae bacterium AT-5844     /     UP000003292 5288 0 5288
   11%
Acetobacteraceae bacterium DB1506     /     UP000249065 5221 0 5221
   11%
Acetobacterium bakii     /     UP000036873 3495 0 3495
   14%
Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) ACEWD UP000007177 3445 13 3432
   13%
Acetobacteroides hydrogenigenes     /     UP000294830 3211 0 3211
   13%
Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) ACEAZ UP000001661 2276 1 2275
   22%
Acetomicrobium mobile (strain ATCC BAA-54 / DSM 13181 / JCM 12221 / NGA) (Acetomicrobium mobile) ACEMN UP000006061 2004 0 2004
   21%
Acetonema longum DSM 6540     /     UP000003240 4283 0 4283
   13%
Acholeplasma laidlawii (strain PG-8A) ACHLI UP000008558 1380 147 1233
   21%
Achromobacter piechaudii ATCC 43553     /     UP000004510 5755 0 5755
   11%
Achromobacter sp. AONIH1     /     UP000236176 5889 0 5889
   12%
Acidaminobacter hydrogenoformans DSM 2784     /     UP000199208 3277 0 3277
   16%
Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) ACIFV UP000001902 2016 13 2003
   22%
Acidaminococcus intestini (strain RyC-MR95) ACIIR UP000007093 2386 0 2386
   18%
Acidaminococcus sp. AM05-11     /     UP000285880 2150 0 2150
   21%
Acidibacillus ferrooxidans     /     UP000190229 2881 0 2881
   18%
Acidibacillus sulfuroxidans     /     UP000245380 2818 0 2818
   18%
Acidihalobacter ferrooxidans     /     UP000243807 3065 0 3065
   21%
Acidihalobacter prosperus     /     UP000029273 3188 0 3188
   19%
Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) ACIFD UP000000771 1935 8 1927
   19%
Acidiphilium cryptum (strain JF-5) ACICJ UP000000245 3538 262 3276
   16%
Acidiphilium rubrum ACIRU UP000186308 3677 0 3677
   15%
Acidipila dinghuensis     /     UP000290253 3909 0 3909
   13%
Acidipila rosea     /     UP000295210 3487 0 3487
   14%
Acidipila sp. 4G-K13     /     UP000264702 3979 0 3979
   13%
Acidipila sp. EB88     /     UP000279598 3402 0 3402
   14%
Acidipropionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / N ... ACIA4 UP000000214 3316 0 3316
   14%
Acidipropionibacterium jensenii     /     UP000277858 2761 0 2761
   16%
Acidithiobacillus caldus (strain SM-1) ACICS UP000006135 3075 0 3075
   18%
Acidithiobacillus ferrivorans SS3     /     UP000009220 3067 0 3067
   19%
Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455) (Ferrob ... ACIF2 UP000001362 3120 212 2908
   19%
Acidithiobacillus sp. CJ-2     /     UP000271650 2736 0 2736
   20%
Acidithiobacillus sp. GGI-221     /     UP000003197 4007 0 4007
   8%
Acidithiobacillus sp. SH     /     UP000234329 2792 0 2792
   20%
Acidobacteria bacterium Mor1     /     UP000078600 4112 0 4112
   10%
Acidobacteriaceae bacterium SBC82     /     UP000253606 7043 0 7043
   7%
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / ... ACIC5 UP000002207 3363 143 3220
   15%
Acidocella aminolytica 101 = DSM 11237     /     UP000032668 3751 0 3751
   15%
Acidocella sp. MX-AZ02     /     UP000006217 3506 0 3506
   15%
Acidomonas methanolica NBRC 104435     /     UP000019760 3270 0 3270
   16%
Acidothermus cellulolyticus (strain ATCC 43068 / 11B) ACIC1 UP000008221 2157 213 1944
   22%
Acidovorax anthurii     /     UP000248856 4779 0 4779
   13%
Acidovorax caeni     /     UP000183656 3855 0 3855
   15%
Acidovorax carolinensis     /     UP000194432 3397 0 3397
   16%
Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli) ACIAC UP000002596 4602 314 4288
   13%
Acidovorax delafieldii 2AN     /     UP000003856 4890 0 4890
   12%
Acidovorax sp. (strain JS42) ACISJ UP000000645 4047 305 3742
   15%
Acidovorax sp. CF316     /     UP000004811 6721 0 6721
   10%
Acidovorax sp. Leaf160     /     UP000051403 3935 0 3935
   16%
Acidovorax sp. MR-S7     /     UP000030646 4762 0 4762
   13%
Acidovorax sp. RAC01     /     UP000094760 3990 0 3990
   15%
Acidovorax temperans     /     UP000032566 3750 0 3750
   16%
Acidovorax valerianellae     /     UP000198781 4680 0 4680
   13%
Acinetobacter baumannii ACIBA UP000032746 3839 0 3839
   16%
Acinetobacter bohemicus ANC 3994     /     UP000013086 3305 0 3305
   18%
Acinetobacter brisouii CIP 110357     /     UP000018418 2927 0 2927
   20%
Acinetobacter calcoaceticus (strain PHEA-2) ACICP UP000007477 3598 6 3592
   17%
Acinetobacter defluvii     /     UP000245977 3447 0 3447
   17%
Acinetobacter equi     /     UP000064939 2679 0 2679
   22%
Acinetobacter junii ACIJU UP000255434 3086 0 3086
   19%
Acinetobacter larvae     /     UP000093391 3108 0 3108
   19%
Acinetobacter marinus     /     UP000242317 2744 0 2744
   21%
Acinetobacter nectaris CIP 110549     /     UP000023785 2541 0 2541
   22%
Acinetobacter populi     /     UP000196536 3291 0 3291
   18%
Acinetobacter qingfengensis     /     UP000185895 2825 0 2825
   20%
Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788     /     UP000018469 2930 0 2930
   20%
Acinetobacter rudis CIP 110305     /     UP000014568 3609 0 3609
   16%
Acinetobacter soli NIPH 2899     /     UP000018433 3154 0 3154
   20%
Acinetobacter sp. ANC 4999     /     UP000242765 2794 0 2794
   21%
Acinetobacter sp. KPC-SM-21     /     UP000245974 3857 0 3857
   16%
Acinetobacter sp. RIT592     /     UP000253985 5904 0 5904
   18%
Acinetobacter sp. TGL-Y2     /     UP000076238 3289 0 3289
   17%
Acinetobacter sp. TTH0-4     /     UP000055186 2613 0 2613
   22%
Acinetobacter sp. Ver3     /     UP000023816 3077 0 3077
   19%
Acinetobacter sp. WCHAc010034     /     UP000264687 3569 0 3569
   17%
Acinetobacter sp. WCHAc010052     /     UP000264387 3314 0 3314
   18%
Acinetobacter towneri     /     UP000186931 2621 0 2621
   22%
Acinetobacter wuhouensis     /     UP000257257 3543 0 3543
   17%
Actibacterium atlanticum     /     UP000024836 3126 0 3126
   17%
Actibacterium mucosum KCTC 23349     /     UP000026249 3616 0 3616
   15%
Actinoalloteichus hoggarensis     /     UP000204221 5520 0 5520
   9%
Actinoalloteichus sp. AHMU CJ021     /     UP000236555 5062 0 5062
   11%
Actinobacillus delphinicola     /     UP000279799 1624 0 1624
   33%
Actinobacillus pleuropneumoniae serotype 5b (strain L20) ACTP2 UP000001432 2004 426 1578
   33%
Actinobacillus rossii     /     UP000254649 2555 0 2555
   26%
Actinobacillus seminis     /     UP000215738 2028 0 2028
   32%
Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / 130Z) ACTSZ UP000001114 2077 405 1672
   32%
Actinobacteria bacterium OK074     /     UP000037991 9137 0 9137
   7%
Actinobacteria bacterium OV320     /     UP000037870 9056 0 9056
   7%
Actinobaculum massiliense ACS-171-V-Col2     /     UP000009888 1696 0 1696
   20%
Actinobaculum sp. 352     /     UP000273303 2387 0 2387
   17%
Actinobaculum sp. oral taxon 183 str. F0552     /     UP000016495 2320 0 2320
   16%
Actinobaculum suis     /     UP000182744 1723 0 1723
   21%
Actinocorallia herbida     /     UP000272400 8804 0 8804
   7%
Actinocrispum wychmicini     /     UP000295680 10734 0 10734
   6%
Actinokineospora auranticolor     /     UP000239203 7400 0 7400
   8%
Actinokineospora bangkokensis     /     UP000186040 6172 0 6172
   9%
Actinokineospora spheciospongiae     /     UP000019277 6610 0 6610
   8%
Actinokineospora terrae     /     UP000199051 6615 0 6615
   8%
Actinomadura bangladeshensis     /     UP000295431 7888 0 7888
   7%
Actinomadura darangshiensis     /     UP000295578 9026 0 9026
   7%
Actinomadura echinospora     /     UP000236723 7946 0 7946
   7%
Actinomadura madurae     /     UP000183413 9393 0 9393
   6%
Actinomadura mexicana     /     UP000198420 8033 0 8033
   7%
Actinomadura meyerae     /     UP000198318 7828 0 7828
   8%
Actinomadura sp. 5-2     /     UP000242367 5700 0 5700
   10%
Actinomadura sp. GC306     /     UP000295346 6472 0 6472
   9%
Actinomadura sp. H3C3     /     UP000294513 9016 0 9016
   6%
Actinomadura sp. KC216     /     UP000294687 8213 0 8213
   7%
Actinomadura sp. KC345     /     UP000295623 7614 0 7614
   8%
Actinomadura sp. LHW52907     /     UP000262882 6669 0 6669
   9%
Actinomadura sp. LHW63021     /     UP000251891 6713 0 6713
   9%
Actinomadura sp. NEAU-G17     /     UP000261811 7310 0 7310
   8%
Actinomadura sp. NEAU-Ht49     /     UP000282674 8327 0 8327
   7%
Actinomadura sp. WAC 06369     /     UP000288610 7670 0 7670
   7%
Actinomadura umbrina     /     UP000256661 6565 0 6565
   9%
Actinomadura viridilutea     /     UP000242524 5839 0 5839
   10%
Actinomyces bovis     /     UP000250006 2148 0 2148
   19%
Actinomyces bowdenii     /     UP000271272 2433 0 2433
   17%
Actinomyces coleocanis DSM 15436     /     UP000010301 1546 0 1546
   22%
Actinomyces denticolens     /     UP000184390 2279 0 2279
   18%
Actinomyces graevenitzii C83     /     UP000003822 1852 0 1852
   19%
Actinomyces hominis     /     UP000235448 1778 0 1778
   20%
Actinomyces hordeovulneris     /     UP000185612 2109 0 2109
   19%
Actinomyces howellii     /     UP000266895 2533 0 2533
   17%
Actinomyces liubingyangii     /     UP000186785 1617 0 1617
   22%
Actinomyces marimammalium     /     UP000186465 1518 0 1518
   21%
Actinomyces massiliensis F0489     /     UP000002941 3129 0 3129
   13%
Actinomyces nasicola     /     UP000185628 2401 0 2401
   18%
Actinomyces neuii BVS029A5     /     UP000006075 1934 0 1934
   20%
Actinomyces ruminicola     /     UP000199671 2725 0 2725
   15%
Actinomyces slackii     /     UP000276899 2571 0 2571
   16%
Actinomyces sp. 2119     /     UP000284680 2334 0 2334
   18%
Actinomyces sp. HMSC065F12     /     UP000176960 2161 0 2161
   18%
Actinomyces sp. oral taxon 175 str. F0384     /     UP000004281 2638 0 2638
   16%
Actinomyces sp. oral taxon 178 str. F0338     /     UP000003389 2524 0 2524
   15%
Actinomyces sp. oral taxon 180 str. F0310     /     UP000006252 2070 0 2070
   19%
Actinomyces sp. oral taxon 448 str. F0400     /     UP000005351 2518 0 2518
   16%
Actinomyces sp. oral taxon 848 str. F0332     /     UP000003063 2591 0 2591
   14%
Actinomyces sp. S4-C9     /     UP000035029 1447 0 1447
   24%
Actinomyces sp. S6-Spd3     /     UP000029604 1762 0 1762
   20%
Actinomyces tangfeifanii     /     UP000176288 1712 0 1712
   21%
Actinomyces urogenitalis DSM 15434     /     UP000004778 2394 0 2394
   16%
Actinomycetales bacterium     /     UP000292654 3454 0 3454
   12%
Actinomycetales bacterium JB111     /     UP000196124 2923 0 2923
   15%
Actinomycetospora cinnamomea     /     UP000245639 5694 0 5694
   10%
Actinomycetospora succinea     /     UP000295705 6278 0 6278
   9%
Actinophytocola oryzae     /     UP000294927 9429 0 9429
   6%
Actinophytocola xanthii     /     UP000185596 7316 0 7316
   8%
Actinophytocola xinjiangensis     /     UP000185696 8134 0 8134
   7%
Actinoplanes atraurantiacus     /     UP000219612 10240 0 10240
   6%
Actinoplanes awajinensis subsp. mycoplanecinus     /     UP000053244 9641 0 9641
   6%
Actinoplanes brasiliensis     /     UP000294901 8372 0 8372
   7%
Actinoplanes derwentensis     /     UP000198688 9207 0 9207
   6%
Actinoplanes friuliensis DSM 7358     /     UP000017746 8558 0 8558
   7%
Actinoplanes lutulentus     /     UP000249341 8953 0 8953
   7%
Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 ... ACTM4 UP000007882 8113 2 8111
   7%
Actinoplanes philippinensis     /     UP000199645 9412 0 9412
   6%
Actinoplanes regularis     /     UP000198415 8959 0 8959
   7%
Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) ACTS5 UP000005440 8249 6 8243
   7%
Actinoplanes sp. ATCC 53533     /     UP000287606 11557 0 11557
   5%
Actinoplanes sp. N902-109     /     UP000013541 8211 0 8211
   7%
Actinoplanes sp. OR16     /     UP000282692 8558 0 8558
   7%
Actinoplanes utahensis ACTUT UP000054537 7275 0 7275
   8%
Actinopolymorpha singaporensis     /     UP000198983 5596 0 5596
   10%
Actinopolyspora erythraea     /     UP000029737 3972 0 3972
   12%
Actinopolyspora mortivallis     /     UP000239352 3817 0 3817
   13%
Actinorugispora endophytica     /     UP000295281 4593 0 4593
   11%
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) ACTMD UP000002213 6912 10 6902
   8%
Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133     /     UP000029877 3375 0 3375
   12%
Actinotalea ferrariae CF5-4     /     UP000019753 3558 0 3558
   13%
Actinotignum schaalii FB123-CNA-2     /     UP000014393 1726 0 1726
   20%
Actinotignum urinale     /     UP000235308 1431 0 1431
   23%
Acutalibacter sp. 1XD8-33     /     UP000270929 3386 0 3386
   11%
Adhaeribacter sp. HMF7605     /     UP000240357 5618 0 5618
   8%
Adhaeribacter sp. HMF7616     /     UP000253919 5268 0 5268
   8%
Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) (Tetrathiobacter kashmirensis) ADVKW UP000005267 3933 0 3933
   11%
Advenella mimigardefordensis DPN7     /     UP000019095 4072 0 4072
   15%
Aequorivita sp. H23M31     /     UP000285517 3051 0 3051
   13%
Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) AEQSU UP000006049 3134 0 3134
   13%
Aequorivita viscosa     /     UP000184172 3078 0 3078
   12%
Aeribacillus pallidus     /     UP000076476 3519 0 3519
   18%
Aeriscardovia aeriphila     /     UP000228976 1287 0 1287
   22%
Aerococcaceae bacterium ZY16052     /     UP000263232 2209 0 2209
   20%
Aerococcus christensenii     /     UP000234775 1496 0 1496
   25%
Aerococcus sanguinicola     /     UP000069912 1731 0 1731
   24%
Aerococcus suis     /     UP000243884 1259 0 1259
   29%
Aerococcus urinae (strain ACS-120-V-Col10a) AERUA UP000008129 1684 1 1683
   22%
Aerococcus urinaehominis     /     UP000062260 1595 0 1595
   24%
Aerococcus viridans ATCC 11563 = CCUG 4311     /     UP000003764 1929 0 1929
   22%
Aeromicrobium camelliae     /     UP000275225 2929 0 2929
   16%
Aeromicrobium choanae     /     UP000191040 3277 0 3277
   14%
Aeromicrobium erythreum     /     UP000067689 3120 0 3120
   15%
Aeromicrobium marinum DSM 15272     /     UP000003111 3077 0 3077
   15%
Aeromicrobium sp. 592     /     UP000244384 3511 0 3511
   14%
Aeromicrobium sp. A1-2     /     UP000257855 3244 0 3244
   15%
Aeromicrobium sp. IC_218     /     UP000293071 3175 0 3175
   15%
Aeromicrobium sp. PE09-221     /     UP000195423 3780 0 3780
   13%
Aeromicrobium sp. Root344     /     UP000051702 3738 0 3738
   13%
Aeromicrobium sp. Root472D3     /     UP000050971 3523 0 3523
   14%
Aeromicrobium sp. Root495     /     UP000051970 3422 0 3422
   14%
Aeromonas cavernicola     /     UP000235861 3504 0 3504
   21%
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NC ... AERHH UP000000756 4121 466 3655
   20%
Aeromonas molluscorum 848     /     UP000013526 3943 0 3943
   19%
Aeromonas schubertii     /     UP000054876 3706 0 3706
   21%
Aeromonas sp. RU39B     /     UP000186911 3949 0 3949
   21%
Aestuariibacter aggregatus     /     UP000184520 4313 0 4313
   16%
Aestuariispira insulae     /     UP000256845 4490 0 4490
   13%
Afifella marina DSM 2698     /     UP000199347 3662 0 3662
   15%
Afipia broomeae     /     UP000229022 7389 0 7389
   9%
Afipia sp. GAS231     /     UP000198617 6976 0 6976
   9%
Afipia sp. P52-10     /     UP000018975 4769 0 4769
   12%
Afipia sp. Root123D2     /     UP000051348 4397 0 4397
   13%
Agarivorans albus MKT 106     /     UP000014461 4397 0 4397
   16%
Agathobacter rectalis (strain ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990) (Eubacte ... AGARV UP000001477 3545 121 3424
   13%
Agathobacter ruminis     /     UP000224563 2568 0 2568
   17%
Agathobaculum butyriciproducens     /     UP000245796 2545 0 2545
   17%
Aggregatibacter segnis ATCC 33393     /     UP000032871 1956 0 1956
   32%
Agreia sp. Leaf210     /     UP000051653 3263 0 3263
   13%
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) AGRFC UP000000813 5349 650 4699
   12%
Agrobacterium radiobacter (strain K84 / ATCC BAA-868) AGRRK UP000001600 6678 288 6390
   10%
Agrobacterium sp. DSM 25559     /     UP000187891 5403 0 5403
   11%
Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis (strain S4)) AGRVS UP000001596 5359 284 5075
   12%
Agrococcus carbonis     /     UP000199649 2592 0 2592
   16%
Agrococcus casei LMG 22410     /     UP000195787 2698 0 2698
   15%
Agrococcus jejuensis     /     UP000198822 3218 0 3218
   13%
Agrococcus jenensis     /     UP000275456 2838 0 2838
   14%
Agrococcus lahaulensis     /     UP000284920 2579 0 2579
   16%
Agrococcus pavilionensis RW1     /     UP000016462 2776 0 2776
   15%
Agromyces albus     /     UP000293865 3965 0 3965
   11%
Agromyces atrinae     /     UP000292686 3277 0 3277
   13%
Agromyces binzhouensis     /     UP000292881 3584 0 3584
   12%
Agromyces sp. FW100M-8     /     UP000291259 3136 0 3136
   13%
Agromyces sp. Leaf222     /     UP000050813 3708 0 3708
   12%
Agromyces sp. MF30-A     /     UP000244729 2774 0 2774
   16%
Agromyces sp. NDB4Y10     /     UP000185889 3157 0 3157
   14%
Agromyces sp. OV415     /     UP000278987 3639 0 3639
   12%
Agromyces sp. SJ-23     /     UP000275048 3729 0 3729
   12%
Ahniella affigens     /     UP000241074 4694 0 4694
   12%
Ahrensia marina     /     UP000038011 3161 0 3161
   17%
Ahrensia sp. R2A130     /     UP000003904 3622 0 3622
   14%
Aidingimonas halophila     /     UP000198500 3626 0 3626
   19%
Akkermansia glycaniphila     /     UP000176204 2530 0 2530
   15%
Akkermansia muciniphila (strain ATCC BAA-835 / Muc) AKKM8 UP000001031 2137 133 2004
   18%
Albidiferax sp. OV413     /     UP000199151 5186 0 5186
   12%
Albidovulum inexpectatum     /     UP000239736 2911 0 2911
   18%
Albidovulum xiamenense     /     UP000199328 3011 0 3011
   18%
Albimonas donghaensis     /     UP000199118 4253 0 4253
   12%
Albimonas pacifica     /     UP000199377 5319 0 5319
   11%
Alcaligenes sp. EGD-AK7     /     UP000016497 3984 0 3984
   15%
Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) ALCBS UP000008871 2752 378 2374
   23%
Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) ALCDB UP000006286 4388 0 4388
   15%
Alcanivorax pacificus W11-5     /     UP000006764 3686 0 3686
   17%
Alcanivorax sp. N3-2A     /     UP000198244 4160 0 4160
   16%
Algibacter alginicilyticus     /     UP000057981 3236 0 3236
   13%
Algibacter aquaticus     /     UP000095713 3717 0 3717
   11%
Algibacter lectus     /     UP000029644 4609 0 4609
   7%
Algoriella xinjiangensis     /     UP000199149 3034 0 3034
   13%
Algoriphagus aquimarinus     /     UP000198790 4362 0 4362
   10%
Algoriphagus machipongonensis     /     UP000003919 3932 0 3932
   11%
Algoriphagus ornithinivorans     /     UP000199564 3549 0 3549
   12%
Algoriphagus sp. A40     /     UP000188460 4441 0 4441
   10%
Algoriphagus sp. M8-2     /     UP000073816 3377 0 3377
   13%
Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) ALIDK UP000007938 4620 1 4619
   13%
Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / JCM 5260 / ... ALIAD UP000001917 3069 6 3063
   17%
Alicyclobacillus acidoterrestris (strain ATCC 49025 / DSM 3922 / CIP 106132 / NCIMB 13137 / GD3B) ALIAG UP000015607 4102 1 4101
   14%
Alicyclobacillus ferrooxydans     /     UP000050482 4142 0 4142
   13%
Alicyclobacillus hesperidum     /     UP000182589 2843 0 2843
   18%
Alicyclobacillus macrosporangiidus     /     UP000183508 3795 0 3795
   14%
Alicyclobacillus montanus     /     UP000184016 3064 0 3064
   16%
Aliidiomarina haloalkalitolerans     /     UP000288212 2391 0 2391
   25%
Aliidiomarina maris     /     UP000249203 2812 0 2812
   21%
Aliidiomarina minuta     /     UP000288293 2751 0 2751
   22%
Aliidiomarina sanyensis     /     UP000288405 2334 0 2334
   26%
Aliidiomarina soli     /     UP000287823 2855 0 2855
   21%
Aliidiomarina taiwanensis     /     UP000286976 2309 0 2309
   25%
Aliifodinibius roseus     /     UP000184041 4289 0 4289
   11%
Aliifodinibius sp. WN023     /     UP000218831 3115 0 3115
   14%
Aliiglaciecola lipolytica E3     /     UP000006334 4327 0 4327
   16%
Aliiroseovarius crassostreae     /     UP000050471 3465 0 3465
   15%
Aliiroseovarius pelagivivens     /     UP000244911 3215 0 3215
   17%
Aliiroseovarius sediminilitoris     /     UP000199650 3295 0 3295
   16%
Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri) ALIF1 UP000000537 3813 573 3240
   21%
Alishewanella agri BL06     /     UP000035062 3152 0 3152
   21%
Alistipes finegoldii CAG:68     /     UP000018154 2386 0 2386
   14%
Alistipes indistinctus YIT 12060     /     UP000006008 2348 0 2348
   17%
Alistipes onderdonkii     /     UP000195772 2758 0 2758
   14%
Alistipes putredinis CAG:67     /     UP000018026 1913 0 1913
   18%
Alistipes sp. AF14-19     /     UP000263263 3142 0 3142
   12%
Alistipes sp. AF17-16     /     UP000265869 2605 0 2605
   16%
Alistipes sp. An31A     /     UP000196483 2054 0 2054
   18%
Alistipes sp. An66     /     UP000195674 2381 0 2381
   16%
Alistipes sp. CAG:157     /     UP000018346 1828 0 1828
   19%
Alistipes sp. CAG:268     /     UP000018329 2200 0 2200
   16%
Alistipes sp. CAG:514     /     UP000018254 1898 0 1898
   17%
Alistipes sp. CAG:831     /     UP000018094 2179 0 2179
   15%
Alistipes sp. CHKCI003     /     UP000198813 2504 0 2504
   14%
Alistipes timonensis JC136     /     UP000183253 2701 0 2701
   15%
Aliterella atlantica CENA595     /     UP000032452 4366 0 4366
   13%
Alkalibacter saccharofermentans DSM 14828     /     UP000184251 2181 0 2181
   22%
Alkalibacterium gilvum     /     UP000198564 2101 0 2101
   19%
Alkalibacterium pelagium     /     UP000199081 2418 0 2418
   20%
Alkalibacterium sp. 20     /     UP000182750 2261 0 2261
   20%
Alkalibacterium sp. AK22     /     UP000020164 2182 0 2182
   21%
Alkalibaculum bacchi     /     UP000253490 2857 0 2857
   17%
Alkalicoccus saliphilus     /     UP000240509 3323 0 3323
   18%
Alkalilimnicola ehrlichii     /     UP000256763 3993 0 3993
   14%
Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) ALKEH UP000001962 2862 369 2493
   22%
Alkalimonas amylolytica ALKAM UP000198773 3615 0 3615
   18%
Alkalinema sp. CACIAM 70d     /     UP000194922 5211 0 5211
   11%
Alkaliphilus metalliredigens (strain QYMF) ALKMQ UP000001572 4467 308 4159
   13%
Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) ALKOO UP000000269 2828 267 2561
   17%
Alkaliphilus peptidifermentans DSM 18978     /     UP000198636 4235 0 4235
   13%
Alkalispirochaeta americana     /     UP000186400 2891 0 2891
   14%
Alkalitalea saponilacus     /     UP000191055 3564 0 3564
   12%
Alkanindiges sp. H1     /     UP000192132 2972 0 2972
   19%
Allisonella histaminiformans     /     UP000199689 1536 0 1536
   25%
Alloactinosynnema album     /     UP000199651 6583 0 6583
   8%
Alloactinosynnema iranicum     /     UP000199501 6124 0 6124
   9%
Alloactinosynnema sp. L-07     /     UP000076116 7267 0 7267
   8%
Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (Chromatium ... ALLVD UP000001441 3211 51 3160
   21%
Allochromatium warmingii (Chromatium warmingii) ALLWA UP000198672 2689 0 2689
   23%
Alloiococcus otitis ATCC 51267     /     UP000009875 1627 0 1627
   23%
Allokutzneria albata     /     UP000183376 7717 0 7717
   8%
Allonocardiopsis opalescens     /     UP000237846 6300 0 6300
   9%
Alloprevotella rava F0323     /     UP000015993 2009 0 2009
   17%
Alloprevotella sp. E39     /     UP000249375 2243 0 2243
   16%
Alloprevotella sp. OH1205_COT-284     /     UP000272376 1708 0 1708
   20%
Alloprevotella tannerae ATCC 51259     /     UP000003460 2806 0 2806
   12%
Alloscardovia macacae     /     UP000243657 1550 0 1550
   22%
Alloscardovia omnicolens F0580     /     UP000016519 1649 0 1649
   20%
Alloscardovia sp. GLDI4/2     /     UP000291289 1578 0 1578
   21%
alpha proteobacterium AAP81b     /     UP000037971 3055 0 3055
   16%
alpha proteobacterium BAL199     /     UP000003417 5881 0 5881
   10%
alpha proteobacterium HIMB114     /     UP000033990 1321 0 1321
   28%
alpha proteobacterium HIMB59     /     UP000006097 1493 0 1493
   21%
alpha proteobacterium IMCC14465     /     UP000004836 1890 0 1890
   24%
alpha proteobacterium Q-1     /     UP000027360 2787 0 2787
   18%
alpha proteobacterium U9-1i     /     UP000188260 4195 0 4195
   12%
Alphaproteobacteria bacterium     /     UP000291202 5432 0 5432
   9%
Alphaproteobacteria bacterium PA2     /     UP000215921 3257 0 3257
   16%
Alphaproteobacteria bacterium PA4     /     UP000215773 2726 0 2726
   17%
Alphaproteobacteria bacterium WS11     /     UP000268192 4118 0 4118
   14%
Alsobacter sp. SH9     /     UP000239772 4752 0 4752
   12%
Altererythrobacter atlanticus     /     UP000034392 3255 0 3255
   15%
Altererythrobacter dongtanensis     /     UP000092932 2897 0 2897
   16%
Altererythrobacter epoxidivorans     /     UP000057938 2773 0 2773
   17%
Altererythrobacter marensis     /     UP000037643 2659 0 2659
   18%
Altererythrobacter namhicola     /     UP000092698 2513 0 2513
   19%
Altererythrobacter sp. B11     /     UP000263119 3568 0 3568
   14%
Altererythrobacter sp. BPTF-M16     /     UP000284721 2967 0 2967
   16%
Altererythrobacter sp. Ery1     /     UP000285092 3275 0 3275
   15%
Altererythrobacter sp. FM1     /     UP000270523 3033 0 3033
   16%
Altererythrobacter sp. HME9302     /     UP000253727 2539 0 2539
   18%
Altererythrobacter sp. HN-Y73     /     UP000284395 3349 0 3349
   15%
Altererythrobacter sp. Root672     /     UP000051125 3454 0 3454
   15%
Altererythrobacter xiamenensis     /     UP000194420 2951 0 2951
   17%
Alteribacillus bidgolensis     /     UP000199017 4578 0 4578
   14%
Alteribacillus iranensis     /     UP000199516 3218 0 3218
   18%
Alteribacillus persepolensis     /     UP000199163 3572 0 3572
   18%
Alteromonadaceae bacterium 2052S.S.stab0a.01     /     UP000282403 4578 0 4578
   14%
Alteromonadaceae bacterium ALS 81     /     UP000286482 3984 0 3984
   18%
Alteromonadaceae bacterium Bs31     /     UP000192901 4297 0 4297
   15%
Alteromonadaceae bacterium M269     /     UP000295324 4871 0 4871
   14%
Alteromonadales bacterium alter-6D02     /     UP000233605 3415 0 3415
   20%
Alteromonas aestuariivivens     /     UP000256561 3306 0 3306
   20%
Alteromonas australica     /     UP000056090 3445 0 3445
   19%
Alteromonas confluentis     /     UP000175691 4086 0 4086
   17%
Alteromonas lipolytica     /     UP000176037 4316 0 4316
   16%
Alteromonas macleodii (strain Black Sea 11) ALTMS UP000006295 3751 0 3751
   18%
Alteromonas naphthalenivorans ALTNA UP000000683 4342 4 4338
   16%
Alteromonas pelagimontana     /     UP000219285 3854 0 3854
   17%
Alteromonas sp. KUL42     /     UP000291481 4106 0 4106
   16%
Alteromonas sp. KUL49     /     UP000293649 3846 0 3846
   17%
Alteromonas sp. MB-3u-76     /     UP000232888 3546 0 3546
   19%
Alteromonas sp. U0105     /     UP000275281 3562 0 3562
   18%
Alysiella crassa     /     UP000254209 2612 0 2612
   21%
Alysiella filiformis DSM 16848     /     UP000219669 2283 0 2283
   24%
Amantichitinum ursilacus     /     UP000037939 4368 0 4368
   15%
Aminicella lysinilytica     /     UP000295500 2119 0 2119
   19%
Aminipila sp. JN-39     /     UP000287601 2438 0 2438
   18%
Aminivibrio pyruvatiphilus     /     UP000295066 2990 0 2990
   15%
Aminobacter sp. Root100     /     UP000051834 4851 0 4851
   12%
Aminobacterium colombiense (strain DSM 12261 / ALA-1) AMICL UP000002366 1872 1 1871
   21%
Aminomonas paucivorans DSM 12260     /     UP000005096 2391 0 2391
   18%
Ammonifex degensii (strain DSM 10501 / KC4) AMMDK UP000002620 2077 0 2077
   22%
Ammoniphilus oxalaticus     /     UP000284219 3305 0 3305
   17%
Ammoniphilus sp. CFH 90114     /     UP000289396 5120 0 5120
   13%
Amnibacterium kyonggiense     /     UP000295344 3603 0 3603
   12%
Amnibacterium sp. DD4a     /     UP000265742 3369 0 3369
   13%
Amnibacterium sp. M8JJ-5     /     UP000244893 3308 0 3308
   13%
Amoebophilus asiaticus (strain 5a2) AMOA5 UP000001227 1253 113 1140
   19%
Amphibacillus marinus     /     UP000199300 3270 0 3270
   17%
Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) AMPXN UP000006294 2384 1 2383
   21%
Amphiplicatus metriothermophilus     /     UP000198346 2934 0 2934
   18%
Amphritea atlantica     /     UP000198749 4348 0 4348
   17%
Amphritea balenae     /     UP000267535 4082 0 4082
   17%
Amphritea sp. MCCC 1K03512     /     UP000283087 3573 0 3573
   19%
Amycolatopsis albispora     /     UP000250434 8085 0 8085
   7%
Amycolatopsis antarctica     /     UP000242444 5495 0 5495
   10%
Amycolatopsis keratiniphila     /     UP000013968 8161 0 8161
   7%
Amycolatopsis marina     /     UP000243799 6643 0 6643
   9%
Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei) AMYMS UP000006138 9551 8 9543
   6%
Amycolatopsis methanolica 239     /     UP000062973 7005 0 7005
   8%
Amycolatopsis saalfeldensis     /     UP000198582 9167 0 9167
   7%
Amycolatopsis sacchari     /     UP000199025 7365 0 7365
   8%
Amycolatopsis sp. 8-3EHSu     /     UP000292003 6878 0 6878
   8%
Amycolatopsis sulphurea     /     UP000243542 5941 0 5941
   9%
Amycolatopsis xylanica     /     UP000199515 8491 0 8491
   7%
Amylibacter cionae     /     UP000235124 3948 0 3948
   13%
Amylibacter kogurei     /     UP000231516 2837 0 2837
   18%
Anabaena cylindrica (strain ATCC 27899 / PCC 7122) ANACC UP000010474 5808 0 5808
   10%
Anabaena sp. 90     /     UP000010101 4480 0 4480
   13%
Anaerobacillus alkalilacustris     /     UP000179524 3502 0 3502
   17%
Anaerobacillus arseniciselenatis     /     UP000180098 3587 0 3587
   14%
Anaerobacillus isosaccharinicus     /     UP000180175 4398 0 4398
   13%
Anaerobacillus macyae     /     UP000035996 3973 0 3973
   17%
Anaerobacterium chartisolvens     /     UP000253034 4253 0 4253
   12%
Anaerobiospirillum thomasii     /     UP000250086 2368 0 2368
   20%
Anaerobium acetethylicum     /     UP000199315 4003 0 4003
   13%
Anaerobranca californiensis DSM 14826     /     UP000243547 2060 0 2060
   22%
Anaerococcus lactolyticus ATCC 51172     /     UP000005984 2252 0 2252
   15%
Anaerococcus octavius     /     UP000234335 1795 0 1795
   19%
Anaerococcus prevotii ACS-065-V-Col13     /     UP000005286 1634 0 1634
   21%
Anaerococcus vaginalis ATCC 51170     /     UP000003821 1764 0 1764
   20%
Anaerocolumna aminovalerica     /     UP000198806 4029 0 4029
   13%
Anaerocolumna jejuensis DSM 15929     /     UP000184386 5667 0 5667
   9%
Anaerocolumna xylanovorans DSM 12503     /     UP000184612 4651 0 4651
   11%
Anaerofilum sp. An201     /     UP000195817 2953 0 2953
   14%
Anaerofustis stercorihominis DSM 17244     /     UP000005178 2331 0 2331
   17%
Anaeroglobus geminatus F0357     /     UP000005481 2148 0 2148
   17%
Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) ANATU UP000008922 3110 2 3108
   13%
Anaeromassilibacillus sp. An172     /     UP000195869 2508 0 2508
   16%
Anaeromassilibacillus sp. An200     /     UP000195336 3479 0 3479
   13%
Anaeromassilibacillus sp. An250     /     UP000195568 3281 0 3281
   13%
Anaeromicrobium sediminis     /     UP000216024 4258 0 4258
   13%
Anaeromyxobacter dehalogenans (strain 2CP-C) ANADE UP000001935 4345 311 4034
   13%
Anaeromyxobacter sp. (strain Fw109-5) ANADF UP000006382 4461 251 4210
   13%
Anaerosphaera aminiphila DSM 21120     /     UP000184032 1915 0 1915
   21%
Anaerosphaera sp. GS7-6-2     /     UP000288812 2100 0 2100
   20%
Anaerosphaera sp. HMSC064C01     /     UP000187591 1440 0 1440
   24%
Anaerospora hongkongensis     /     UP000295063 4497 0 4497
   13%
Anaerosporobacter mobilis DSM 15930     /     UP000184038 4544 0 4544
   11%
Anaerosporomusa subterranea ANASB UP000076268 3585 0 3585
   15%
Anaerostipes hadrus ANAHA UP000008960 2771 0 2771
   15%
Anaerostipes sp. 494a     /     UP000242190 2255 0 2255
   20%
Anaerostipes sp. 992a     /     UP000187371 2529 0 2529
   18%
Anaerostipes sp. CAG:276     /     UP000018135 3141 0 3141
   15%
Anaerotignum neopropionicum     /     UP000070539 2804 0 2804
   16%
Anaerotruncus colihominis DSM 17241     /     UP000003803 4421 0 4421
   10%
Anaerotruncus sp. 1XD22-93     /     UP000280657 6934 0 6934
   12%
Anaerotruncus sp. 22A2-44     /     UP000276301 2733 0 2733
   16%
Anaerotruncus sp. AF02-27     /     UP000284135 3622 0 3622
   12%
Anaerotruncus sp. CAG:390     /     UP000018385 2237 0 2237
   13%
Anaerotruncus sp. CAG:528     /     UP000018024 1705 0 1705
   23%
Anaerotruncus sp. G3(2012)     /     UP000014129 3406 0 3406
   12%
Anaerovibrio sp. JC8     /     UP000192538 2405 0 2405
   19%
Anaerovirgula multivorans     /     UP000198304 5186 0 5186
   11%
Anaplasma marginale (strain Florida) ANAMF UP000007307 939 110 829
   32%
Anaplasma phagocytophilum (strain HZ) ANAPZ UP000001943 1330 161 1169
   21%
Ancalomicrobiaceae bacterium SA-279     /     UP000292781 4425 0 4425
   13%
Ancrocorticia populi     /     UP000245283 2288 0 2288
   18%
Ancylobacter rudongensis     /     UP000198889 4123 0 4123
   14%
Ancylomarina sp. M1P     /     UP000285794 3457 0 3457
   13%
Anditalea andensis     /     UP000027821 4341 0 4341
   10%
Andreesenia angusta     /     UP000180254 2379 0 2379
   20%
Andreprevotia lacus DSM 23236     /     UP000192761 4303 0 4303
   15%
Aneurinibacillus migulanus (Bacillus migulanus) ANEMI UP000037269 5649 0 5649
   12%
Aneurinibacillus soli     /     UP000217696 3962 0 3962
   15%
Aneurinibacillus sp. XH2     /     UP000065566 3424 0 3424
   17%
Angustibacter sp. Root456     /     UP000051170 3495 0 3495
   14%
Anoxybacillus amylolyticus     /     UP000076865 3192 0 3192
   20%
Anoxybacillus flavithermus (strain DSM 21510 / WK1) ANOFW UP000000742 2819 228 2591
   22%
Anoxybacillus sp. B7M1     /     UP000076753 3736 0 3736
   18%
Anoxybacillus sp. BCO1     /     UP000030702 4427 0 4427
   8%
Anoxybacillus vitaminiphilus     /     UP000248555 3513 0 3513
   19%
Anoxybacter fermentans     /     UP000267250 3011 0 3011
   16%
Anseongella ginsenosidimutans     /     UP000295807 3575 0 3575
   12%
Antarctobacter heliothermus     /     UP000203589 4970 0 4970
   11%
Antricoccus suffuscus     /     UP000237752 4340 0 4340
   11%
Aphanothece hegewaldii CCALA 016     /     UP000239001 4827 0 4827
   12%
Aphanothece sacrum FPU1     /     UP000287247 4301 0 4301
   13%
Apibacter adventoris     /     UP000238042 2420 0 2420
   15%
Apibacter mensalis     /     UP000182761 2083 0 2083
   17%
Aquabacter spiritensis     /     UP000294664 4631 0 4631
   13%
Aquabacterium commune     /     UP000294593 3649 0 3649
   16%
Aquabacterium olei     /     UP000244892 3666 0 3666
   17%
Aquabacterium sp. KMB7     /     UP000292120 3324 0 3324
   17%
Aquabacterium sp. NJ1     /     UP000029993 3620 0 3620
   16%
Aquabacterium sp. SJQ9     /     UP000269265 4667 0 4667
   13%
Aquabacterium sp. W35     /     UP000301751 5458 0 5458
   12%
Aquamicrobium aerolatum DSM 21857     /     UP000242763 3495 0 3495
   15%
Aquamicrobium defluvii     /     UP000019849 4454 0 4454
   13%
Aquamicrobium sp. LC103     /     UP000050670 5730 0 5730
   11%
Aquaspirillum sp. LM1     /     UP000188659 3268 0 3268
   20%
Aquicella lusitana     /     UP000254720 2370 0 2370
   21%
Aquifex aeolicus (strain VF5) AQUAE UP000000798 1554 787 767
   31%
Aquiflexum balticum DSM 16537     /     UP000192333 4889 0 4889
   9%
Aquimarina aggregata     /     UP000076715 5047