HAMAP rule MF_00088
General rule information
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| Accession | MF_00088 |
| Dates | 1-JUN-2001 (Created)
17-FEB-2023 (Last updated, Version 27) |
| Name | KhpA |
| Scope(s) |
Bacteria |
| Template(s) | Q8DQG4 (KHPA_STRR6); A0A0H2ZMB4 (KHPA_STRP2); F9UP09 (KHPA_LACPL); [ Recover all ] |
| Triggered by |
HAMAP; MF_00088 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | KHPA |
| Protein name | RecName: Full=RNA-binding protein KhpA; AltName: Full=KH-domain protein A; |
| Gene name | Name=khpA; |
Comments
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| case not <OC:Actinomycetota> and not <OC:Aquificae> and not <OC:Chlamydiota> | |
| FUNCTION | A probable RNA chaperone. Forms a complex with KhpB which binds to cellular RNA and controls its expression. Plays a role in peptidoglycan (PG) homeostasis and cell length regulation. |
| SUBUNIT | Forms a complex with KhpB. |
| else | |
| FUNCTION | A probable RNA-binding protein. |
| end case | |
| SUBCELLULAR LOCATION | Cytoplasm. |
| SIMILARITY | Belongs to the KhpA RNA-binding protein family. |
Keywords
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| case not <OC:Actinomycetota> and not <OC:Aquificae> and not <OC:Chlamydiota> | |
| Cell shape | |
| Cell wall biogenesis/degradation | |
| Chaperone | |
| end case | |
| Cytoplasm | |
| RNA-binding | |
Gene Ontology
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| case not <OCellular component:Actinomycetota> and not <OC:Aquificae> and not <OC:Chlamydiota> | |
| GO:0009252; Biological process:peptidoglycan biosynthetic process | |
| end case | |
| GO:0005737; Cellular component:cytoplasm | |
| GO:0003723; Molecular function:RNA binding | |
Cross-references
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| PROSITE | PS50084; KH_TYPE_1; 1; |
Features
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Additional information
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| Size range | 74-92 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |
| Comments | The KhpB partner can be found in (at least) Chloroflexota, Deltaproteobacteria, Bacillota, Spirochaetota, Mycoplasmatota, Thermodesulfobacteria and Thermotogae but not in Actinomycetota, Aquificae or Chlamydiota. |