HAMAP rule MF_00274
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_00274 |
| Accession | MF_00274 |
| Dates | 28-FEB-2005 (Created)
01-JUN-2023 (Last updated, Version 20) |
| Name | DNA_YbaB_EbfC |
| Scope(s) |
Bacteria |
| Template(s) | O51418; Q9RXV7; P0A8B5; P44711; [ Recover all ] |
| Triggered by |
HAMAP; MF_00274 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
| Identifier | YBAB |
| Protein name | RecName: Full=Nucleoid-associated protein YbaB; |
| Gene name | Name=ybaB; |
| else case <OC:Borrelia> | |
| Identifier | EBFC |
| Protein name | RecName: Full=Nucleoid-associated protein EbfC; |
| Gene name | Name=ebfC; |
| else | |
| Identifier | Ynnn |
| Protein name | RecName: Full=Nucleoid-associated protein |
| end case | |
Comments
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| FUNCTION | Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. |
| SUBUNIT | Homodimer. |
| SUBCELLULAR LOCATION | Cytoplasm, nucleoid. |
| SIMILARITY | Belongs to the YbaB/EbfC family. |
Keywords
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Gene Ontology
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| GO:0003677; Molecular function:DNA binding |
| GO:0043590; Cellular component:bacterial nucleoid |
| GO:0005737; Cellular component:cytoplasm |
Cross-references
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| Pfam | PF02575; YbaB_DNA_bd; 1; |
| PIRSF | PIRSF004555; UCP004555; 1; |
| NCBIfam | TIGR00103; DNA_YbaB_EbfC; 1; |
Features
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Additional information
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| Size range | 94-133 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |