HAMAP rule MF_00327
General rule information
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| Accession | MF_00327 |
| Dates | 1-JUN-2001 (Created)
21-SEP-2023 (Last updated, Version 30) |
| Name | Ribosomal_eL43 |
| Scope(s) |
Archaea |
| Template(s) | P60619 (RL37A_HALMA); [ Recover all ] |
| Triggered by |
HAMAP; MF_00327 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | RL37A |
| Protein name | RecName: Full=Large ribosomal subunit protein eL43; |
| Gene name | Name=rpl37ae; |
Comments
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| FUNCTION | Binds to the 23S rRNA. |
| case <FT:1> | |
| COFACTOR | Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.; |
| end case | |
| SUBUNIT | Part of the 50S ribosomal subunit. |
| case <FTGroup:1> | |
| SIMILARITY | Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily. |
| else | |
| SIMILARITY | Belongs to the eukaryotic ribosomal protein eL43 family. |
| end case | |
Keywords
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| Ribonucleoprotein | |
| Ribosomal protein | |
| RNA-binding | |
| rRNA-binding | |
| case <FT:1> | |
| Metal-binding | |
| Zinc | |
| Zinc-finger | |
| end case | |
Gene Ontology
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| GO:0070180; Molecular function:large ribosomal subunit rRNA binding | |
| GO:0006412; Biological process:translation | |
| case <FTGroup:1> | |
| GO:0008270; Molecular function:zinc ion binding | |
| end case | |
Cross-references
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Features
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| From: RL37A_HALMA (P60619) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| ZN_FING | 39 | 60 | /note="C4-type" | C-x(2)-C-x(14,15)-C-x(2)-C | ||||||||
| BINDING | 39 | 39 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 42 | 42 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 57 | 57 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 60 | 60 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
Additional information
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| Size range | 70-101 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |
| Comments | Most but not all of the Halobacteriaceae do not have the conserved cysteine residues that may be able to bind a zinc. |