HAMAP rule MF_00411

General rule information [?]

Accession	MF_00411
Dates	1-JUN-2001 (Created) 1-JUN-2023 (Last updated, Version 32)

Name	RNApol_arch_Rpo1C

Scope

Archaea

Templates

B0R8D3 (RPO1C_HALS3); P09847 (RPO1C_METTW); P11514 (RPO1C_SULAC); Q03586 (RPO1C_THEAC): [Recover all]

Triggered by

HAMAP; MF_00411 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier

RPO1C

Protein name

RecName:		Full=DNA-directed RNA polymerase subunit Rpo1C;
		EC 2.7.7.6;
AltName:		Full=DNA-directed RNA polymerase subunit A'';

Gene name

rpo1C, rpoA2

Comments [?]

Function	DNA-dependent RNA polymerase (RNAP) catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Forms part of the jaw domain.
Catalytic activity	RHEA:21248: a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1) EC 2.7.7.6
Subunit	Part of the RNA polymerase complex.
Subcellular location	Cytoplasm.
Similarity	Belongs to the RNA polymerase beta' chain family.

Keywords [?]

Cytoplasm
DNA-binding
Transferase
Nucleotidyltransferase
Transcription
DNA-directed RNA polymerase

Gene Ontology [?]

GO:0005737; Cellular component: cytoplasm.
GO:0003677; Molecular function: DNA binding.
GO:0003899; Molecular function: DNA-directed 5'-3' RNA polymerase activity.
GO:0006351; Biological process: DNA-templated transcription.

Cross-references [?]

Pfam	PF04998; RNA_pol_Rpb1_5; 1;
NCBIfam	TIGR02389; RNA_pol_rpoA2; 1;

Additional information [?]

Size range	375-510 amino acids
Related rules	None
Fusion	Nter: <Unknown>; Cter: None
Comments	Unknown N-terminal domain in METTH, METTL, THEAC and THEVO. Intein deleted in METJA. In Thaumarchaeota Rpo1N and Rpo1C are fused.

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