HAMAP rule MF_00462
General rule information
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Accession | MF_00462 |
Dates | 15-OCT-2001 (Created)
1-JUN-2023 (Last updated, Version 40) |
Name | RsxD_RnfD |
Scope(s) |
Archaea Bacteria |
Template(s) | P76182 (RSXD_ECOLI); Q52715 (RNFD_RHOCA); A5F2R1 (RNFD_VIBC3); H6LC31 (RNFD_ACEWD); D8GR67 (RNFD_CLOLD); Q8TSY3 (RNFD_METAC); [ Recover all ] |
Triggered by |
HAMAP; MF_00462 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
Identifier | RSXD |
Protein name | RecName: Full=Ion-translocating oxidoreductase complex subunit D; EC=7.-.-.-; AltName: Full=Rsx electron transport complex subunit D; |
Gene name | Name=rsxD; |
else | |
Identifier | RNFD |
Protein name | RecName: Full=Ion-translocating oxidoreductase complex subunit D; EC=7.-.-.-; AltName: Full=Rnf electron transport complex subunit D; |
Gene name | Name=rnfD; |
end case |
Comments
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case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
FUNCTION | Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR. |
else | |
FUNCTION | Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. |
end case | |
COFACTOR | Name=FMN; Xref=ChEBI:CHEBI:58210; |
case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
SUBUNIT | The complex is composed of six subunits: RsxA, RsxB, RsxC, RsxD, RsxE and RsxG. |
else case <OC:Bacteria> | |
SUBUNIT | The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. |
else case <OC:Archaea> | |
SUBUNIT | The Rnf complex is probably composed of eight subunits, including RnfA, RnfB, RnfC, RnfD, RnfE and RnfG. |
end case | |
case (<OC:Pseudomonadota> or (defined <Property:Membrane> and <Property:Membrane=2>)) and not <OC:Paracoccaceae> | |
SUBCELLULAR LOCATION | Cell inner membrane; Multi-pass membrane protein. |
else case <OC:Paracoccaceae> | |
SUBCELLULAR LOCATION | Cellular chromatophore membrane; Multi-pass membrane protein. |
else | |
SUBCELLULAR LOCATION | Cell membrane; Multi-pass membrane protein. |
end case | |
SIMILARITY | Belongs to the NqrB/RnfD family. |
Keywords
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case (<OC:Pseudomonadota> or (defined <Property:Membrane> and <Property:Membrane=2>)) and not <OC:Paracoccaceae> | |
Cell inner membrane | |
end case | |
case not <OC:Paracoccaceae> | |
Cell membrane | |
end case | |
Electron transport | |
Flavoprotein | |
FMN | |
Membrane | |
case <OC:Paracoccaceae> | |
Nitrogen fixation | |
end case | |
Phosphoprotein | |
Transmembrane | |
Transmembrane helix | |
<a href="https://www.uniprot.org/keywords/KW-1278">Translocase</a> | |
Transport |
Gene Ontology
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GO:0022900; Biological process:electron transport chain | |
case <OCellular component:Paracoccaceae> | |
GO:0009399; Biological process:nitrogen fixation | |
end case | |
case not <OCellular component:Paracoccaceae> | |
GO:0005886; Cellular component:plasma membrane | |
end case |
Cross-references
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Pfam | PF03116; NQR2_RnfD_RnfE; 1; |
NCBIfam | TIGR01946; rnfD; 1; |
General | Transmembrane; -; 7-10; |
Features
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From: RNFD_VIBC3 (A5F2R1) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
MOD_RES | 187 | 187 | /note="FMN phosphoryl threonine" | T |
Additional information
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Size range | 280-420 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |