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HAMAP rule MF_00480

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General rule information [?]

Accession MF_00480
Dates 3-NOV-2001 (Created)
21-SEP-2023 (Last updated, Version 38)
Name Ribosomal_uS7
Scope(s) Bacteria
Archaea
Plastid
Template(s) P22744 (RS7_GEOSE); P02359 (RS7_ECOLI); P17291 (RS7_THET8); O59230 (RS7_PYRHO); [ Recover all ]
Triggered by
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_00480_B (Get profile general information and statistics)
end case
case c? <OC:Archaea>
HAMAP; MF_00480_A (Get profile general information and statistics)
end case

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier RS7
Protein name RecName: Full=Small ribosomal subunit protein uS7;
Gene name Name=rpsG;
end case
case <OC:Cyanobacteriota>
Identifier RS7
Protein name RecName: Full=Small ribosomal subunit protein uS7;
Gene name Name=rpsG; Synonyms=rps7;
end case
case <OC:Archaea>
Identifier RS7
Protein name RecName: Full=Small ribosomal subunit protein uS7;
Gene name Name=rps7;
end case
case <OG:Chloroplast>
Identifier RR7
Protein name RecName: Full=Small ribosomal subunit protein uS7c;
Gene name Name=rps7;
end case

Comments [?]

case <OC:Bacteria>
FUNCTIONOne of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
SUBUNITPart of the 30S ribosomal subunit. Contacts proteins S9 and S11.
end case
case <OC:Archaea>
FUNCTIONOne of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center.
SUBUNITPart of the 30S ribosomal subunit.
end case
case <OG:Chloroplast>
FUNCTIONOne of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
SUBUNITPart of the 30S ribosomal subunit.
SUBCELLULAR LOCATIONPlastid, chloroplast.
end case
SIMILARITYBelongs to the universal ribosomal protein uS7 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
RNA-binding
rRNA-binding
case not <OG:Chloroplast> and not <OC:Archaea>
tRNA-binding
end case

Gene Ontology [?]

GO:0019843; Molecular function:rRNA binding
case not <OG:Chloroplast> and not <OCellular component:Archaea>
GO:0000049; Molecular function:tRNA binding
end case
GO:0006412; Biological process:translation
case <OG:Chloroplast>
GO:0009507; Cellular component:chloroplast
end case

Cross-references [?]

Pfam PF00177; Ribosomal_S7; 1;
NCBIfam TIGR01028; S7_S5_E_A; 1;
NCBIfam TIGR01029; RpsG_bact; 1;
PROSITE PS00052; RIBOSOMAL_S7; 1;

Features [?]


Additional information [?]

Size range 184-227 amino acids
Related rules None
Fusion Nter: None Cter: None



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