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HAMAP rule MF_00519
General rule information
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Accession | MF_00519 |
Dates | 18-DEC-2001 (Created)
19-NOV-2022 (Last updated, Version 31) |
Name | Arabinose_Isome |
Scope(s) |
Bacteria |
Template(s) | P08202 (ARAA_ECOLI); Q9S467 (ARAA_GEOSE); [ Recover all ] |
Triggered by |
HAMAP; MF_00519 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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Identifier | ARAA |
Protein name | RecName: Full=L-arabinose isomerase; EC=5.3.1.4; |
Gene name | Name=araA; |
Comments
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FUNCTION | Catalyzes the conversion of L-arabinose to L-ribulose. |
CATALYTIC ACTIVITY | Reaction=beta-L-arabinopyranose = L-ribulose; Xref=Rhea:RHEA:14821, ChEBI:CHEBI:16880, ChEBI:CHEBI:40886; EC=5.3.1.4; |
case <FTGroup:1> | |
COFACTOR | Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Note=Binds 1 Mn(2+) ion per subunit.; |
end case | |
PATHWAY | Carbohydrate degradation; L-arabinose degradation via L- ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. |
case <OC:Enterobacterales> | |
SUBUNIT | Homohexamer. |
end case | |
SIMILARITY | Belongs to the arabinose isomerase family. |
Keywords
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Arabinose catabolism | |
Carbohydrate metabolism | |
Isomerase | |
case <FTGroup:1> | |
Manganese | |
Metal-binding | |
end case |
Gene Ontology
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GO:0008733; Molecular function:L-arabinose isomerase activity | |
case <FTGroup:1> | |
GO:0030145; Molecular function:manganese ion binding | |
end case | |
GO:0019569; Biological process:L-arabinose catabolic process to xylulose 5-phosphate |
Cross-references
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Pfam | PF02610; Arabinose_Isome; 1; |
Features
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From: ARAA_ECOLI (P08202) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
BINDING | 306 | 306 | /ligand="Mn(2+)" /ligand_id="ChEBI:CHEBI:29035" |
E | 1 | |||||||
BINDING | 333 | 333 | /ligand="Mn(2+)" /ligand_id="ChEBI:CHEBI:29035" |
E | 1 | |||||||
BINDING | 350 | 350 | /ligand="Mn(2+)" /ligand_id="ChEBI:CHEBI:29035" |
H | 1 | |||||||
BINDING | 450 | 450 | /ligand="Mn(2+)" /ligand_id="ChEBI:CHEBI:29035" |
H | 1 |
Additional information
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Size range | 474-511 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |