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HAMAP rule MF_00651

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General rule information [?]

Accession MF_00651
Dates 11-JUN-2003 (Created)
1-JUN-2023 (Last updated, Version 24)
Name Nuclease_YqgF
Scope(s) Bacteria
Template(s) P0A8I1 (YQGF_ECOLI); O34634 (YQGF_BACSU); Q5SHA1 (YQGF_THET8); [ Recover all ]
Triggered by HAMAP; MF_00651 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier YQGF
Protein name RecName: Full=Putative pre-16S rRNA nuclease;
case <OC:Enterobacterales>
Gene name Name=yqgF;
end case

Comments [?]

FUNCTIONCould be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
SIMILARITYBelongs to the YqgF HJR family.

Keywords [?]

Gene Ontology [?]

GO:0016788; Molecular function:hydrolase activity, acting on ester bonds
GO:0005737; Cellular component:cytoplasm
GO:0000967; Biological process:rRNA 5'-end processing
GO:0042254; Biological process:ribosome biogenesis

Cross-references [?]

Pfam PF03652; UPF0081; 1;
NCBIfam TIGR00250; RNAse_H_YqgF; 1;

Features [?]

Additional information [?]

Size range 127-202 amino acids
Related rules None
Fusion Nter: None Cter: None
Comments Originally suggested to be a Holliday junction resolvase (PubMed=10982859); that is probably not its function. Divergent THEMA not shown in alignment and not used in size range

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