HAMAP logo

HAMAP rule MF_00657

Send feedback

General rule information [?]

Accession MF_00657
Dates 15-JUN-2003 (Created)
17-FEB-2023 (Last updated, Version 40)
Name Hydroxyl_YbiX
Scope
Bacteria; Cyanobacteriota
Bacteria; Pseudomonadota
Template None
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Identifier
YBIX
Protein name
RecName: Full=PKHD-type hydroxylase YbiX;
EC 1.14.11.-;
Gene name
ybiX
else
Identifier
Ynnn
Protein name
RecName: Full=PKHD-type hydroxylase ;
EC 1.14.11.-;
end case

Comments [?]

case <FTGroup:1>
Cofactor Fe(2+)
Note: Binds 1 Fe(2+) ion per subunit.
L-ascorbate
end case

Keywords [?]

Oxidoreductase
Dioxygenase
case <FTGroup:1>
Metal-binding
Iron
Vitamin C
end case

Gene Ontology [?]

case <FTGroup:1>
GO:0005506; Molecular function: iron ion binding.
end case
GO:0016706; Molecular function: 2-oxoglutarate-dependent dioxygenase activity.

Cross-references [?]

Pfam PF03171; 2OG-FeII_Oxy; 1;
PROSITE PS51471; FE2OG_OXY; 1; trigger=PRU00805;

Features [?]

From: YBIX_ECOLI (P75779)
Key     From     To       Description   Tag   Condition   FTGroup
BINDING     96     96       /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875     H   1
BINDING     98     98       /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875     D   1
BINDING     158     158       /ligand="Fe cation" /ligand_id="ChEBI:CHEBI:24875     H   1
BINDING     168     168       /ligand="2-oxoglutarate" /ligand_id="ChEBI:CHEBI:16810     R  

Additional information [?]

Size range 218-259 amino acids
Related rules None
Fusion None


View rule in raw text format (no links)