HAMAP rule MF_00962

General rule information [?]

PURL	https://purl.expasy.org/hamap/rule/MF_00962
Accession	MF_00962
Dates	27-MAY-2013 (Created) 01-JUN-2023 (Last updated, Version 11)
Name	Sigma70_FliA
Scope(s)	Bacteria Pseudomonadota
Template(s)	P0AEM6; [ Recover all ]
Triggered by	HAMAP; MF_00962 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier	FLIA
Protein name	RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28;
Gene name	Name=fliA;

Comments [?]

FUNCTION	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes.
SUBCELLULAR LOCATION	Cytoplasm.
SIMILARITY	Belongs to the sigma-70 factor family. FliA subfamily.

Keywords [?]

Gene Ontology [?]

GO:0003677; Molecular function:DNA binding

GO:0016987; Molecular function:sigma factor activity

GO:0010468; Biological process:regulation of gene expression

GO:0006352; Biological process:DNA-templated transcription initiation

GO:0005737; Cellular component:cytoplasm

Cross-references [?]

Features [?]

From: FLIA_ECOLI (P0AEM6)

Key

From

Description

Tag

Condition

FTGroup

DNA_BIND

207

226

/note="H-T-H motif"

REGION

/note="Sigma-70 factor domain-2"

REGION

166

/note="Sigma-70 factor domain-3"

REGION

185

233

/note="Sigma-70 factor domain-4"

MOTIF

/note="Interaction with polymerase core subunit RpoC"

D-[LMI]-[LIVMT]-Q

Additional information [?]