HAMAP rule MF_00974
General rule information
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Accession | MF_00974 |
Dates | 16-OCT-2013 (Created) 1-JUN-2023 (Last updated, Version 7) |
Name | DNA_primase_DnaG |
Scope | Bacteria |
Templates | P0ABS5 (DNAG_ECOLI); O67465 (DNAG_AQUAE); Q9X4D0 (DNAG_GEOSE): [Recover all] |
Triggered by |
Propagated annotation
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Identifier, protein and gene names
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Identifier |
|
Protein name |
|
Gene name |
|
Comments
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Function | RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. |
Catalytic activity | Reaction=ssDNA + n NTP = ssDNA/pppN(pN)n-1 hybrid + (n-1) diphosphate.; EC=2.7.7.101; |
Subunit | Monomer. Interacts with DnaB. |
case <FTTag:zinc>
Cofactor | Zn(2+) Note: Binds 1 zinc ion per monomer. |
Domain | Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain. |
end case
Similarity | Belongs to the DnaG primase family. |
Keywords
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DNA replication
DNA-binding
DNA-directed RNA polymerase
Nucleotidyltransferase
Primosome
Transcription
Transferase
DNA-binding
DNA-directed RNA polymerase
Nucleotidyltransferase
Primosome
Transcription
Transferase
case <FTTag:zinc>
end case
Gene Ontology
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GO:0003896; Molecular function: DNA primase activity.
case <FTTag:zinc>
GO:0008270; Molecular function: zinc ion binding.
end case
GO:0006269; Biological process: DNA replication, synthesis of RNA primer.
Cross-references
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PROSITE | PS50880; TOPRIM; 1; trigger=PRU00995; |
Pfam | PF10410; DnaB_bind; 1; |
PF08278; DnaG_DnaB_bind; 1; | |
PF13662; Toprim_4; 1; | |
PF08275; Toprim_N; 1; | |
PF01807; zf-CHC2; 1; | |
PF01751; Toprim; 1; | |
NCBIfam | TIGR01391; dnaG; 1; |
PIRSF | PIRSF002811; DnaG; 1; |
Features
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From: DNAG_ECOLI (P0ABS5) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
ZN_FING | 40 | 64 | CHC2-type | zinc | C-x(2)-H-x(17,18)-C-x(2,3)-C |
Additional information
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Size range | 410-800 amino acids |
Related rules | None |
Fusion | None |