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HAMAP rule MF_01251

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General rule information [?]

Accession MF_01251
Dates 6-MAY-2004 (Created)
1-JUN-2023 (Last updated, Version 30)
Name UPF0313
Scope(s) Bacteria
Template(s) None (); [ Recover all ]
Triggered by HAMAP; MF_01251 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Identifier YGIQ
Protein name RecName: Full=UPF0313 protein YgiQ;
Gene name Name=ygiQ;
Identifier Ynnn
Protein name RecName: Full=UPF0313 protein ;
end case

Comments [?]

case <FTGroup:1>
COFACTOR Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Note=Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.;
end case
SIMILARITYBelongs to the UPF0313 family.

Keywords [?]

Gene Ontology [?]

case <FTGroup:1>
GO:0005506; Molecular function:iron ion binding
end case

Cross-references [?]

Pfam PF04055; Radical_SAM; 1;
NCBIfam TIGR03904; SAM_YgiQ; 1;

Features [?]

From: YGIQ_ECOLI (Q46861)
Key From To Description Tag Condition FTGroup
BINDING 386 386 /ligand="[4Fe-4S] cluster"
C 1
BINDING 390 390 /ligand="[4Fe-4S] cluster"
C 1
BINDING 393 393 /ligand="[4Fe-4S] cluster"
C 1

Additional information [?]

Size range 550-830 amino acids
Related rules None
Fusion Nter: <Unknown> Cter: None
Comments Proteins of this UPF may catalyze a radical-mediated reaction via the reductive cleavage of S-adenosylmethionine (SAM) through a peculiar Fe-S center. Sequence from YERPE is probably a pseudogene because it is frameshifted, but it has been rebuilt in this family. Unknown N-terminal domain in METAC; sequence not included in alignment.

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