HAMAP rule MF_01261
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_01261 |
| Accession | MF_01261 |
| Dates | 29-JUL-2005 (Created)
03-SEP-2024 (Last updated, Version 26) |
| Name | CCA_bact_type1 |
| Scope(s) |
Bacteria Pseudomonadota |
| Template(s) | P06961; Q7SIB1; [ Recover all ] |
| Triggered by |
HAMAP; MF_01261 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | CCA |
| Protein name | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2'-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2',3'-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; |
| Gene name | Name=cca; |
Comments
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| FUNCTION | Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. tRNA 3'-terminal CCA addition is required both for tRNA processing and repair. Also involved in tRNA surveillance by mediating tandem CCA addition to generate a CCACCA at the 3' terminus of unstable tRNAs. While stable tRNAs receive only 3'-terminal CCA, unstable tRNAs are marked with CCACCA and rapidly degraded. |
| CATALYTIC ACTIVITY | Reaction=a tRNA precursor + 2 CTP + ATP = a tRNA with a 3' CCA end + 3 diphosphate; Xref=Rhea:RHEA:14433, Rhea:RHEA-COMP:10465, Rhea:RHEA- COMP:10468, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:37563, ChEBI:CHEBI:74896, ChEBI:CHEBI:83071; EC=2.7.7.72; |
| CATALYTIC ACTIVITY | Reaction=a tRNA with a 3' CCA end + 2 CTP + ATP = a tRNA with a 3' CCACCA end + 3 diphosphate; Xref=Rhea:RHEA:76235, Rhea:RHEA- COMP:10468, Rhea:RHEA-COMP:18655, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:37563, ChEBI:CHEBI:83071, ChEBI:CHEBI:195187; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:76236; |
| COFACTOR | Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Note=Magnesium is required for nucleotidyltransferase activity.; |
| COFACTOR | Name=Ni(2+); Xref=ChEBI:CHEBI:49786; Note=Nickel for phosphatase activity.; |
| SUBUNIT | Monomer. Can also form homodimers and oligomers. |
| DOMAIN | Comprises two domains: an N-terminal domain containing the nucleotidyltransferase activity and a C-terminal HD domain associated with both phosphodiesterase and phosphatase activities. |
| MISCELLANEOUS | A single active site specifically recognizes both ATP and CTP and is responsible for their addition. |
| SIMILARITY | Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 1 subfamily. |
Keywords
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| ATP-binding |
| Hydrolase |
| Magnesium |
| Metal-binding |
| Multifunctional enzyme |
| Nickel |
| Nucleotide-binding |
| Nucleotidyltransferase |
| RNA repair |
| RNA-binding |
| Transferase |
| tRNA processing |
Gene Ontology
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| GO:0000049; Molecular function:tRNA binding |
| GO:0000166; Molecular function:nucleotide binding |
| GO:0000287; Molecular function:magnesium ion binding |
| GO:0004112; Molecular function:cyclic-nucleotide phosphodiesterase activity |
| GO:0004810; Molecular function:CCA tRNA nucleotidyltransferase activity |
| GO:0005524; Molecular function:ATP binding |
| GO:0016791; Molecular function:phosphatase activity |
| GO:0001680; Biological process:tRNA 3'-terminal CCA addition |
Cross-references
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Features
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| From: CCA_ECOLI (P06961) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 21 | 21 | /ligand="Mg(2+)" /ligand_id="ChEBI:CHEBI:18420" |
[DE] | ||||||||
| BINDING | 23 | 23 | /ligand="Mg(2+)" /ligand_id="ChEBI:CHEBI:18420" |
D | ||||||||
| BINDING | 8 | 8 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
G | ||||||||
| BINDING | 8 | 8 | /ligand="CTP" /ligand_id="ChEBI:CHEBI:37563" |
G | ||||||||
| BINDING | 11 | 11 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
R | ||||||||
| BINDING | 11 | 11 | /ligand="CTP" /ligand_id="ChEBI:CHEBI:37563" |
R | ||||||||
| BINDING | 91 | 91 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
R | ||||||||
| BINDING | 91 | 91 | /ligand="CTP" /ligand_id="ChEBI:CHEBI:37563" |
R | ||||||||
| BINDING | 137 | 137 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
R | ||||||||
| BINDING | 137 | 137 | /ligand="CTP" /ligand_id="ChEBI:CHEBI:37563" |
R | ||||||||
| BINDING | 140 | 140 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
R | ||||||||
| BINDING | 140 | 140 | /ligand="CTP" /ligand_id="ChEBI:CHEBI:37563" |
R | ||||||||
Additional information
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| Size range | 368-429 amino acids |
| Related rules |
MF_01262 |
| Fusion | Nter: None Cter: None |
| Comments | The CCA-adding enzyme family consists of 4 different subfamilies: 3 bacterial subfamilies (MF_01261, MF_01262 and MF_01263) and 1 archaeal subfamily (MF_01264). FT lines are propagated from G.stearothermophilus CCA-adding enzyme (type 3 subfamily, MF_01263) whose X-ray structure is known. |