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Annotation rule MF_01307
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General rule information [?]

Accession MF_01307
Dates 3-DEC-2002 (Created)
19-NOV-2019 (Last updated, Version 34)
Name Ribosomal_S5
Scope
Bacteria
Archaea
Plastid
Templates P02357 (RS5_GEOSE); P21467 (RS5_BACSU); P0A7W1 (RS5_ECOLI); P0A7W4 (RS5_SALTY); Q5SHQ5 (RS5_THET8): [Recover all]
case <OC:Bacteria> or <OG:Chloroplast>
end case

case <OC:Archaea>
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier
RS5
Protein name
RecName: Full=30S ribosomal protein S5;
Gene name
rpsE
else case <OC:Cyanobacteria>
Identifier
RS5
Protein name
RecName: Full=30S ribosomal protein S5;
Gene name
rpsE, rps5
else case <OC:Archaea>
Identifier
RS5
Protein name
RecName: Full=30S ribosomal protein S5;
Gene name
rps5
else case <OG:Chloroplast>
Identifier
RR5
Protein name
RecName: Full=30S ribosomal protein S5, chloroplastic;
Gene name
rps5
end case

Comments [?]

Function With S4 and S12 plays an important role in translational accuracy.
case <OC:Bacteria>
Function Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
Subunit Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.
else case <OC:Archaea>
Subunit Part of the 30S ribosomal subunit. Contacts protein S4.
else case <OG:Chloroplast>
Subunit Part of the 30S ribosomal subunit. Contacts protein S4.
Subcellular location Plastid, chloroplast.
end case
Domain The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.
Similarity Belongs to the universal ribosomal protein uS5 family.

Keywords [?]


Gene Ontology [?]

GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

Pfam PF00333; Ribosomal_S5; 1;
PF03719; Ribosomal_S5_C; 1;
TIGRFAMs TIGR01021; RpsE_bact; 1;
TIGR01020; RpsE_arch; 1;
PROSITE PS00585; RIBOSOMAL_S5; 1;
PS50881; S5_DSRBD; 1; trigger=PRU00268;

Additional information [?]

case <OC:Bacteria>
Size range 146-254 amino acids
end case
case <OC:Archaea>
Size range 197-236 amino acids
end case
Related rules None
Fusion None
Comments CARRP and CENSY are fairly different, made atypical.