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HAMAP rule MF_01326

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General rule information [?]

Accession MF_01326
Dates 8-MAR-2004 (Created)
1-JUN-2023 (Last updated, Version 30)
Name Ribosomal_L24
Scope
Bacteria
Archaea
Plastid
Templates P60624 (RL24_ECOLI); Q9RXJ1 (RL24_DEIRA); Q5SHP9 (RL24_THET8); P10972 (RL24_HALMA): [Recover all]
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by
end case

case <OC:Archaea>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier
RL24
Protein name
RecName: Full=Large ribosomal subunit protein uL24;
Gene name
rplX
else case <OC:Cyanobacteriota>
Identifier
RL24
Protein name
RecName: Full=Large ribosomal subunit protein uL24;
Gene name
rplX, rpl24
else case <OC:Archaea>
Identifier
RL24
Protein name
RecName: Full=Large ribosomal subunit protein uL24;
Gene name
rpl24
else case <OG:Chloroplast>
Identifier
RK24
Protein name
RecName: Full=Large ribosomal subunit protein uL24c;
Gene name
rpl24
end case

Comments [?]

Function One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
case <OC:Bacteria>
Function One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
Subunit Part of the 50S ribosomal subunit.
else case <OC:Archaea>
Function Located at the polypeptide exit tunnel on the outside of the subunit.
Subunit Part of the 50S ribosomal subunit.
else case <OG:Chloroplast>
Subunit Part of the 50S ribosomal subunit.
Subcellular location Plastid, chloroplast.
end case
Similarity Belongs to the universal ribosomal protein uL24 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
RNA-binding
rRNA-binding

Gene Ontology [?]

GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

Pfam PF00467; KOW; 1;
NCBIfam TIGR01079; RplX_bact; 1;
TIGR01080; RplX_A_E; 1;
PROSITE PS01108; RIBOSOMAL_L24; 1;

Additional information [?]

case <OC:Bacteria>
Size range 73-149 amino acids
end case
case <OC:Archaea>
Size range 111-168 amino acids
end case
Related rules None
Fusion Nter: None; Cter: <Unknown>
Comments ONYPE, THEAC and THEVO have a short protein that is considered to be atypical and is not used in the seed alignment. ACHLI is C- terminally fused to an unknown domain.


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