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HAMAP rule MF_01337

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General rule information [?]

Accession MF_01337
Dates 22-JUL-2005 (Created)
22-SEP-2023 (Last updated, Version 20)
Name Ribosomal_uL18
Scope(s) Bacteria
Archaea
Plastid
Template(s) P09415 (RL18_GEOSE); Q9RSL2 (RL18_DEIRA); P0C018 (RL18_ECOLI); Q5SHQ4 (RL18_THET8); P14123 (RL18_HALMA); [ Recover all ]
Triggered by
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_01337_B (Get profile general information and statistics)
end case
case c? <OC:Archaea>
HAMAP; MF_01337_A (Get profile general information and statistics)
end case

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier RL18
Protein name RecName: Full=Large ribosomal subunit protein uL18;
Gene name Name=rplR;
else case <OC:Cyanobacteriota>
Identifier RL18
Protein name RecName: Full=Large ribosomal subunit protein uL18;
Gene name Name=rplR; Synonyms=rpl18;
else case <OC:Archaea>
Identifier RL18
Protein name RecName: Full=Large ribosomal subunit protein uL18;
Gene name Name=rpl18;
else case <OG:Chloroplast>
Identifier RK18
Protein name RecName: Full=Large ribosomal subunit protein uL18c;
Gene name Name=rpl18;
end case

Comments [?]

case <OC:Bacteria>
FUNCTIONThis is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
SUBUNITPart of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
else case <OC:Archaea>
FUNCTIONThis is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
SUBUNITPart of the 50S ribosomal subunit. Contacts the 5S and 23S rRNAs.
else case <OG:Chloroplast>
FUNCTIONBinds 5S rRNA, forms part of the central protuberance of the 50S subunit.
SUBUNITPart of the 50S ribosomal subunit; contacts the 5S rRNA.
SUBCELLULAR LOCATIONPlastid, chloroplast.
end case
SIMILARITYBelongs to the universal ribosomal protein uL18 family.

Keywords [?]


Gene Ontology [?]

GO:0019843; Molecular function:rRNA binding
GO:0006412; Biological process:translation
case <OG:Chloroplast>
GO:0009507; Cellular component:chloroplast
end case

Cross-references [?]

Pfam PF00861; Ribosomal_L18p; 1;
PRINTS PR00058; RIBOSOMALL5; 1;
NCBIfam TIGR00060; L18_bact; 1;

Features [?]


Additional information [?]

Size range 158-214 amino acids
Related rules None
Fusion Nter: None Cter: None



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