HAMAP rule MF_01337
General rule information
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| Accession | MF_01337 |
| Dates | 22-JUL-2005 (Created)
22-SEP-2023 (Last updated, Version 20) |
| Name | Ribosomal_uL18 |
| Scope(s) |
Bacteria Archaea Plastid |
| Template(s) | P09415 (RL18_GEOSE); Q9RSL2 (RL18_DEIRA); P0C018 (RL18_ECOLI); Q5SHQ4 (RL18_THET8); P14123 (RL18_HALMA); [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_01337_B (Get profile general information and statistics) end case
case c? <OC:Archaea>
HAMAP; MF_01337_A (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
| Identifier | RL18 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL18; |
| Gene name | Name=rplR; |
| else case <OC:Cyanobacteriota> | |
| Identifier | RL18 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL18; |
| Gene name | Name=rplR; Synonyms=rpl18; |
| else case <OC:Archaea> | |
| Identifier | RL18 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL18; |
| Gene name | Name=rpl18; |
| else case <OG:Chloroplast> | |
| Identifier | RK18 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL18c; |
| Gene name | Name=rpl18; |
| end case | |
Comments
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| case <OC:Bacteria> | |
| FUNCTION | This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. |
| SUBUNIT | Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs. |
| else case <OC:Archaea> | |
| FUNCTION | This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. |
| SUBUNIT | Part of the 50S ribosomal subunit. Contacts the 5S and 23S rRNAs. |
| else case <OG:Chloroplast> | |
| FUNCTION | Binds 5S rRNA, forms part of the central protuberance of the 50S subunit. |
| SUBUNIT | Part of the 50S ribosomal subunit; contacts the 5S rRNA. |
| SUBCELLULAR LOCATION | Plastid, chloroplast. |
| end case | |
| SIMILARITY | Belongs to the universal ribosomal protein uL18 family. |
Keywords
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Gene Ontology
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| GO:0019843; Molecular function:rRNA binding | |
| GO:0006412; Biological process:translation | |
| case <OG:Chloroplast> | |
| GO:0009507; Cellular component:chloroplast | |
| end case | |
Cross-references
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Features
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Additional information
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| Size range | 158-214 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |