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Annotation rule MF_01348
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General rule information [?]

Accession MF_01348
Dates 23-MAY-2006 (Created)
19-NOV-2019 (Last updated, Version 14)
Name Ycf48
Scope
Bacteria; Cyanobacteria
Plastid
Template P73069 (YC48L_SYNY3)
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Cyanobacteria>
Identifier
YC48L
Protein name
RecName: Full=Ycf48-like protein;
end case
case <OG:Chloroplast>
Identifier
P2SAF
Protein name
RecName: Full=Photosystem II stability/assembly factor HCF136;
AltName: Full=Ycf48-like protein;
Flags: Precursor;
Gene name
hcf136, ycf48
end case

Comments [?]

case <OC:Cyanobacteria>
Function Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
end case
case <OG:Chloroplast>
Function Essential for photosystem II (PSII) biogenesis; required for assembly of an early intermediate in PSII assembly that includes D2 (psbD) and cytochrome b559.
Subcellular location Plastid, chloroplast thylakoid lumen.
end case
Similarity Belongs to the Ycf48 family.

Keywords [?]

case <OG:Chloroplast>
Membrane
Photosynthesis
Photosystem II
Thylakoid
end case
Repeat
Signal

Gene Ontology [?]

case <OG:Chloroplast>
GO:0009543; Cellular component: chloroplast thylakoid lumen.
end case

Cross-references [?]

Pfam PF02012; BNR; 4;

Computed features [?]

General Signal; -; 1; trigger=yes;

Features [?]

From: YC48L_SYNY3 (P73069)
Key     From     To       Description   Tag   Condition   FTGroup
REPEAT     73     84       BNR 1        
REPEAT     116     127       BNR 2        
REPEAT     159     170       BNR 3        
REPEAT     287     298       BNR 4        

Additional information [?]

Size range 323-416 amino acids
Related rules None
Fusion None
Comments Might be a lipoprotein in GLOVI, SYNPX, SYNS9, SYNSC and Prochlorococcus species.


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