HAMAP rule MF_01476
General rule information
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| Accession | MF_01476 |
| Dates | 29-JUN-2012 (Created)
17-MAR-2023 (Last updated, Version 10) |
| Name | Ribosomal_L44e |
| Scope(s) |
Archaea |
| Template(s) | P32411 (RL44E_HALMA); [ Recover all ] |
| Triggered by |
HAMAP; MF_01476 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | RL44E |
| Protein name | RecName: Full=Large ribosomal subunit protein eL42; |
| Gene name | Name=rpl44e; |
Comments
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| FUNCTION | Binds to the 23S rRNA. |
| case <FTGroup:1> | |
| COFACTOR | Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.; |
| end case | |
| SUBUNIT | Part of the 50S ribosomal subunit. |
| SIMILARITY | Belongs to the eukaryotic ribosomal protein eL42 family. |
Keywords
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| Ribonucleoprotein | |
| Ribosomal protein | |
| RNA-binding | |
| rRNA-binding | |
| case <FTGroup:1> | |
| Metal-binding | |
| Zinc | |
| Zinc-finger | |
| end case | |
Gene Ontology
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| GO:0070180; Molecular function:large ribosomal subunit rRNA binding | |
| GO:0006412; Biological process:translation | |
| case <FTGroup:1> | |
| GO:0008270; Molecular function:zinc ion binding | |
| end case | |
Cross-references
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Features
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| From: RL44E_HALMA (P32411) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| ZN_FING | 11 | 74 | /note="C4-type" | C-x(2)-C-x(55,65)-C-x(2)-C | ||||||||
| BINDING | 11 | 11 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 14 | 14 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 71 | 71 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 74 | 74 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
Additional information
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| Size range | 83-110 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |