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HAMAP rule MF_01476

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General rule information [?]

Accession MF_01476
Dates 29-JUN-2012 (Created)
17-MAR-2023 (Last updated, Version 10)
Name Ribosomal_L44e
Scope(s) Archaea
Template(s) P32411 (RL44E_HALMA); [ Recover all ]
Triggered by HAMAP; MF_01476 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier RL44E
Protein name RecName: Full=Large ribosomal subunit protein eL42;
Gene name Name=rpl44e;

Comments [?]

FUNCTIONBinds to the 23S rRNA.
case <FTGroup:1>
COFACTOR Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.;
end case
SUBUNITPart of the 50S ribosomal subunit.
SIMILARITYBelongs to the eukaryotic ribosomal protein eL42 family.

Keywords [?]

Gene Ontology [?]

GO:0070180; Molecular function:large ribosomal subunit rRNA binding
GO:0006412; Biological process:translation
case <FTGroup:1>
GO:0008270; Molecular function:zinc ion binding
end case

Cross-references [?]

Pfam PF00935; Ribosomal_L44; 1;

Features [?]

From: RL44E_HALMA (P32411)
Key From To Description Tag Condition FTGroup
ZN_FING 11 74 /note="C4-type" C-x(2)-C-x(55,65)-C-x(2)-C
BINDING 11 11 /ligand="Zn(2+)"
C 1
BINDING 14 14 /ligand="Zn(2+)"
C 1
BINDING 71 71 /ligand="Zn(2+)"
C 1
BINDING 74 74 /ligand="Zn(2+)"
C 1

Additional information [?]

Size range 83-110 amino acids
Related rules None
Fusion Nter: None Cter: None

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