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HAMAP rule MF_01476

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General rule information [?]

Accession MF_01476
Dates 29-JUN-2012 (Created)
17-MAR-2023 (Last updated, Version 10)
Name Ribosomal_L44e
Scope
Archaea
Template P32411 (RL44E_HALMA)
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

Identifier
RL44E
Protein name
RecName: Full=Large ribosomal subunit protein eL42;
Gene name
rpl44e

Comments [?]

Function Binds to the 23S rRNA.
case <FTGroup:1>
Cofactor Zn(2+)
Note: Binds 1 zinc ion per subunit.
end case
Subunit Part of the 50S ribosomal subunit.
Similarity Belongs to the eukaryotic ribosomal protein eL42 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
RNA-binding
rRNA-binding
case <FTGroup:1>
Metal-binding
Zinc
Zinc-finger
end case

Gene Ontology [?]

GO:0070180; Molecular function: large ribosomal subunit rRNA binding.
GO:0006412; Biological process: translation.
case <FTGroup:1>
GO:0008270; Molecular function: zinc ion binding.
end case

Cross-references [?]

PROSITE PS01172; RIBOSOMAL_L44E; 1;
Pfam PF00935; Ribosomal_L44; 1;

Features [?]

From: RL44E_HALMA (P32411)
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     11     74       C4-type     C-x(2)-C-x(55,65)-C-x(2)-C  
BINDING     11     11       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105     C   1
BINDING     14     14       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105     C   1
BINDING     71     71       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105     C   1
BINDING     74     74       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105     C   1

Additional information [?]

Size range 83-110 amino acids
Related rules None
Fusion None


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