HAMAP rule MF_02017
General rule information
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| Accession | MF_02017 |
| Dates | 18-DEC-2008 (Created)
20-NOV-2019 (Last updated, Version 11) |
| Name | RodZ |
| Scope(s) |
Bacteria Enterobacterales |
| Template(s) | P27434 (RODZ_ECOLI); [ Recover all ] |
| Triggered by |
HAMAP; MF_02017 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | RODZ |
| Protein name | RecName: Full=Cytoskeleton protein RodZ; |
| Gene name | Name=rodZ; |
Comments
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| FUNCTION | Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis. |
| SUBCELLULAR LOCATION | Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell. |
| DOMAIN | The helix-turn-helix (HTH) motif in the cytoplasmic domain of the N-terminus is involved in the formation of spirals to maintain the rigid rod shape. As this protein is anchored in the cytoplasmic membrane, the HTH motif may contribute to protein-protein interactions to form the RodZ helix, which is localized beneath the cytoplasmic membrane. The C-terminal domain may be critical for determination of the rod shape by probably interacting with enzymes required for synthesis of the peptidoglycan layer, including PBPs in the periplasm. |
| SIMILARITY | Belongs to the RodZ family. |
Keywords
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| Cell inner membrane |
| Cell membrane |
| Cell shape |
| Membrane |
| Signal-anchor |
| Transmembrane |
| Transmembrane helix |
Gene Ontology
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| GO:0008360; Biological process:regulation of cell shape |
| GO:0005886; Cellular component:plasma membrane |
Cross-references
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| PROSITE | PS50943; HTH_CROC1; 1; |
| Pfam | PF01381; HTH_3; 1; |
| General | Transmembrane; -; 1; |
Features
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| From: RODZ_ECOLI (P27434) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| TOPO_DOM | Nter | 111 | /note="Cytoplasmic" | |||||||||
| TRANSMEM | 112 | 132 | /note="Helical; Signal-anchor for type II membrane protein" | |||||||||
| TOPO_DOM | 133 | Cter | /note="Periplasmic" | |||||||||
| DOMAIN | 19 | 71 | /note="HTH cro/C1-type" | |||||||||
| DNA_BIND | 30 | 49 | /note="H-T-H motif" | |||||||||
Additional information
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| Size range | 321-368 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |