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HAMAP rule MF_00010

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General rule information [?]

Accession MF_00010
Dates 1-JUN-2001 (Created)
20-NOV-2019 (Last updated, Version 48)
Name UPF0060
Archaea; Methanosarcinales
Template P76169 (YNFA_ECOLI)

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Protein name
RecName: Full=UPF0060 membrane protein YnfA;
Gene name
Protein name
RecName: Full=UPF0060 membrane protein ;
end case

Comments [?]

case not defined <Property:Membrane> or <Property:Membrane=1>
Subcellular location Cell membrane; Multi-pass membrane protein.
else case <Property:Membrane=2>
Subcellular location Cell inner membrane; Multi-pass membrane protein.
end case
Similarity Belongs to the UPF0060 family.

Keywords [?]

case defined <Property:Membrane> and <Property:Membrane=2>
end case

Gene Ontology [?]

GO:0005886; Cellular component: plasma membrane.

Cross-references [?]

Pfam PF02694; UPF0060; 1;

Computed features [?]

case not <OC:Escherichia> and not <OC:Shigella> and not <OC:Salmonella>
General Transmembrane; -; 3-4; trigger=yes;
end case

Features [?]

case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
From: YNFA_ECOLI (P76169)
Key     From     To       Description   Tag   Condition   FTGroup
TOPO_DOM     Nter     5       Periplasmic        
TRANSMEM     6     26       Helical        
TOPO_DOM     27     30       Cytoplasmic        
TRANSMEM     31     51       Helical        
TOPO_DOM     52     60       Periplasmic        
TRANSMEM     61     81       Helical        
TOPO_DOM     82     84       Cytoplasmic        
TRANSMEM     85     105       Helical        
TOPO_DOM     106     Cter       Periplasmic        
end case

Additional information [?]

Size range 101-122 amino acids
Related rules None
Fusion None