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Annotation rule MF_00010 |
General rule information
[?]
Accession |
MF_00010 |
Dates |
1-JUN-2001 (Created) 20-NOV-2019 (Last updated, Version 48) |
Scope |
Bacteria
Archaea; Methanosarcinales |
Propagated annotation
[?]
Identifier, protein and gene names
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case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Protein name |
RecName:
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Full=UPF0060 membrane protein YnfA;
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|
else
Protein name |
RecName:
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Full=UPF0060 membrane protein ;
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|
end case
case not defined <Property:Membrane> or <Property:Membrane=1>
Subcellular location |
Cell membrane; Multi-pass membrane protein. |
else case <Property:Membrane=2>
Subcellular location |
Cell inner membrane; Multi-pass membrane protein. |
end case
Similarity |
Belongs to the UPF0060 family. |
case defined <Property:Membrane> and <Property:Membrane=2>
end case
case not <OC:Escherichia> and not <OC:Shigella> and not <OC:Salmonella>
General |
Transmembrane; -; 3-4; trigger=yes; |
end case
case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
From: YNFA_ECOLI (P76169) |
Key
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From
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To
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Description
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Tag
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Condition
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FTGroup
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TOPO_DOM
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Nter
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5
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Periplasmic
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|
|
|
|
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TRANSMEM
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6
|
|
26
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Helical
|
|
|
|
|
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TOPO_DOM
|
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27
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|
30
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Cytoplasmic
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|
|
|
|
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TRANSMEM
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31
|
|
51
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Helical
|
|
|
|
|
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TOPO_DOM
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52
|
|
60
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|
Periplasmic
|
|
|
|
|
|
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TRANSMEM
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|
61
|
|
81
|
|
Helical
|
|
|
|
|
|
|
TOPO_DOM
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|
82
|
|
84
|
|
Cytoplasmic
|
|
|
|
|
|
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TRANSMEM
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|
85
|
|
105
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Helical
|
|
|
|
|
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TOPO_DOM
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106
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Cter
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Periplasmic
|
|
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|
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end case
Additional information
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Size range |
101-122 amino acids |
Related rules |
None |
Fusion |
None |