HAMAP rule MF_00335
General rule information
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Accession | MF_00335 |
Dates | 1-JUN-2001 (Created) 1-JUN-2023 (Last updated, Version 36) |
Name | RNase_Y |
Scope | Bacteria |
Templates | Q2FZ08 (RNY_STAA8); O31774 (RNY_BACSU): [Recover all] |
Triggered by |
Propagated annotation
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Identifier, protein and gene names
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Identifier |
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Protein name |
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Gene name |
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Comments
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Function | Endoribonuclease that initiates mRNA decay. |
case <Feature:Transmembrane==1>
Subcellular location | Cell membrane; Single-pass membrane protein. |
end case
Similarity | Belongs to the RNase Y family. |
Keywords
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case <Feature:Transmembrane==1>
end case
Gene Ontology
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GO:0003723; Molecular function: RNA binding.
GO:0004521; Molecular function: RNA endonuclease activity.
GO:0006402; Biological process: mRNA catabolic process.
GO:0005886; Cellular component: plasma membrane.
GO:0004521; Molecular function: RNA endonuclease activity.
GO:0006402; Biological process: mRNA catabolic process.
GO:0005886; Cellular component: plasma membrane.
Cross-references
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Pfam | PF01966; HD; 1; |
PF00013; KH_1; 1; | |
NCBIfam | TIGR00277; HDIG; 1; |
TIGR03319; YmdA_YtgF; 1; | |
PROSITE | PS50084; KH_TYPE_1; 1; trigger=PRU00117; |
PS51831; HD; 1; trigger=PRU01175; |
Computed features
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General | Transmembrane; -; 0-1; trigger=yes; |
Additional information
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Size range | 469-650 amino acids |
Related rules | None |
Fusion | None |