HAMAP rule MF_00335
General rule information
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PURL | https://purl.expasy.org/hamap/rule/MF_00335 |
Accession | MF_00335 |
Dates | 1-JUN-2001 (Created)
1-JUN-2023 (Last updated, Version 36) |
Name | RNase_Y |
Scope(s) |
Bacteria |
Template(s) | Q2FZ08 (RNY_STAA8); O31774 (RNY_BACSU); [ Recover all ] |
Triggered by |
HAMAP; MF_00335 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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Identifier | RNY |
Protein name | RecName: Full=Ribonuclease Y; Short=RNase Y; EC=3.1.-.-; |
Gene name | Name=rny; |
Comments
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FUNCTION | Endoribonuclease that initiates mRNA decay. |
case <Feature:Transmembrane==1> | |
SUBCELLULAR LOCATION | Cell membrane; Single-pass membrane protein. |
end case | |
SIMILARITY | Belongs to the RNase Y family. |
Keywords
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Endonuclease | |
Hydrolase | |
Nuclease | |
RNA-binding | |
case <Feature:Transmembrane==1> | |
Cell membrane | |
Membrane | |
Transmembrane | |
Transmembrane helix | |
end case |
Gene Ontology
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GO:0003723; Molecular function:RNA binding |
GO:0004521; Molecular function:RNA endonuclease activity |
GO:0006402; Biological process:mRNA catabolic process |
GO:0005886; Cellular component:plasma membrane |
Cross-references
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Pfam | PF01966; HD; 1; |
Pfam | PF00013; KH_1; 1; |
NCBIfam | TIGR00277; HDIG; 1; |
NCBIfam | TIGR03319; YmdA_YtgF; 1; |
PROSITE | PS50084; KH_TYPE_1; 1; |
PROSITE | PS51831; HD; 1; |
General | Transmembrane; -; 0-1; |
Features
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Additional information
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Size range | 469-650 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |