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HAMAP rule MF_00335

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General rule information [?]

Accession MF_00335
Dates 1-JUN-2001 (Created)
1-JUN-2023 (Last updated, Version 36)
Name RNase_Y
Scope
Bacteria
Templates Q2FZ08 (RNY_STAA8); O31774 (RNY_BACSU): [Recover all]
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

Identifier
RNY
Protein name
RecName: Full=Ribonuclease Y;
Short=RNase Y;
EC 3.1.-.-;
Gene name
rny

Comments [?]

Function Endoribonuclease that initiates mRNA decay.
case <Feature:Transmembrane==1>
Subcellular location Cell membrane; Single-pass membrane protein.
end case
Similarity Belongs to the RNase Y family.

Keywords [?]

Endonuclease
Hydrolase
Nuclease
RNA-binding
case <Feature:Transmembrane==1>
Cell membrane
Membrane
Transmembrane
Transmembrane helix
end case

Gene Ontology [?]

GO:0003723; Molecular function: RNA binding.
GO:0004521; Molecular function: RNA endonuclease activity.
GO:0006402; Biological process: mRNA catabolic process.
GO:0005886; Cellular component: plasma membrane.

Cross-references [?]

Pfam PF01966; HD; 1;
PF00013; KH_1; 1;
NCBIfam TIGR00277; HDIG; 1;
TIGR03319; YmdA_YtgF; 1;
PROSITE PS50084; KH_TYPE_1; 1; trigger=PRU00117;
PS51831; HD; 1; trigger=PRU01175;

Computed features [?]

General Transmembrane; -; 0-1; trigger=yes;

Additional information [?]

Size range 469-650 amino acids
Related rules None
Fusion None


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