HAMAP rule MF_00438
General rule information
[?]
| Accession | MF_00438 |
| Dates | 22-AUG-2001 (Created)
24-JUL-2023 (Last updated, Version 34) |
| Name | PSII_PsbM |
| Scope(s) |
Bacteria Cyanobacteriota Plastid |
| Template(s) | Q8DHA7 (PSBM_THEVB); P12312 (PSBM_THEVL); P72701 (PSBM_SYNY3); P62111 (PSBM_TOBAC); [ Recover all ] |
| Triggered by |
HAMAP; MF_00438 (Get profile general information and statistics) |
Propagated annotation
[?]
Identifier, protein and gene names
[?]
| Identifier | PSBM |
| Protein name | RecName: Full=Photosystem II reaction center protein M; Short=PSII-M; |
| Gene name | Name=psbM; |
Comments
[?]
| FUNCTION | One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. |
| case <OC:Cyanobacteriota> | |
| SUBUNIT | PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, peripheral proteins PsbO, CyanoQ (PsbQ),PsbU, PsbV and a large number of cofactors. It forms dimeric complexes. |
| else | |
| SUBUNIT | PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes. |
| end case | |
| case <OG:Chloroplast> | |
| SUBCELLULAR LOCATION | Plastid, chloroplast thylakoid membrane; Single- pass membrane protein. |
| else case <OC:Gloeobacter> | |
| SUBCELLULAR LOCATION | Cell inner membrane; Single-pass membrane protein. |
| else | |
| SUBCELLULAR LOCATION | Cellular thylakoid membrane; Single-pass membrane protein. |
| end case | |
| SIMILARITY | Belongs to the PsbM family. |
Keywords
[?]
| Photosynthesis | |
| Photosystem II | |
| case <OC:Gloeobacter> | |
| Cell membrane | |
| Cell inner membrane | |
| else | |
| Thylakoid | |
| end case | |
| Reaction center | |
| Membrane | |
| Transmembrane | |
| Transmembrane helix | |
Gene Ontology
[?]
| GO:0015979; Biological process:photosynthesis | |
| case <OG:Chloroplast> | |
| GO:0009535; Cellular component:chloroplast thylakoid membrane | |
| else case <OCellular component:Gloeobacter> | |
| GO:0005886; Cellular component:plasma membrane | |
| else; https://www.ebi.ac.uk/QuickGO/term/else | |
| GO:0042651; Cellular component:thylakoid membrane | |
| end case | |
Cross-references
[?]
| Pfam | PF05151; PsbM; 1; |
| NCBIfam | TIGR03038; PS_II_psbM; 1; |
| General | Transmembrane; -; 1; |
Features
[?]
Additional information
[?]
| Size range | 31-52 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |