Due to maintenance work, this service will be unavailable from
Mon Nov 11 17:30 until
Tue Nov 12 09:00
CET.
Apologies for the inconvenience.
HAMAP rule MF_00503
General rule information
[?]
| Accession | MF_00503 |
| Dates | 9-DEC-2001 (Created)
22-SEP-2023 (Last updated, Version 33) |
| Name | Ribosomal_bL9 |
| Scope(s) |
Bacteria Plastid |
| Template(s) | P0A7R1 (RL9_ECOLI); Q9RY49 (RL9_DEIRA); Q5SLQ1 (RL9_THET8); [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_00503 (Get profile general information and statistics) end case
|
Propagated annotation
[?]
Identifier, protein and gene names
[?]
| case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
| Identifier | RL9 |
| Protein name | RecName: Full=Large ribosomal subunit protein bL9; |
| Gene name | Name=rplI; |
| else case <OC:Cyanobacteriota> | |
| Identifier | RL9 |
| Protein name | RecName: Full=Large ribosomal subunit protein bL9; |
| Gene name | Name=rplI; Synonyms=rpl9; |
| else case <OG:Chloroplast> | |
| Identifier | RK9 |
| Protein name | RecName: Full=Large ribosomal subunit protein bL9c; |
| Gene name | Name=rpl9; |
| end case | |
Comments
[?]
| FUNCTION | Binds to the 23S rRNA. |
| case <OG:Chloroplast> | |
| SUBCELLULAR LOCATION | Plastid, chloroplast. |
| end case | |
| SIMILARITY | Belongs to the bacterial ribosomal protein bL9 family. |
Keywords
[?]
| case <FT:1> | |
| Acetylation | |
| end case | |
| Ribonucleoprotein | |
| Ribosomal protein | |
| RNA-binding | |
| rRNA-binding | |
Gene Ontology
[?]
| GO:0019843; Molecular function:rRNA binding | |
| GO:0006412; Biological process:translation | |
| case <OG:Chloroplast> | |
| GO:0009507; Cellular component:chloroplast | |
| end case | |
Cross-references
[?]
| Pfam | PF03948; Ribosomal_L9_C; 1; |
| Pfam | PF01281; Ribosomal_L9_N; 1; |
| NCBIfam | TIGR00158; L9; 1; |
| PROSITE | PS00651; RIBOSOMAL_L9; 1; |
Features
[?]
| From: RL9_ECOLI (P0A7R1) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| case <OC:Escherichia> or <OC:Shigella> | ||||||||||||
| MOD_RES | 89 | 89 | /note="N6-acetyllysine" | K | ||||||||
| end case | ||||||||||||
Additional information
[?]
| Size range | 145-222 amino acids |
| Related rules |
None |
| Fusion | Nter: <Unknown> Cter: None |
| Comments | Fused with a large unknown region containing GGDEF signaling and phosphoesterase domains in phytoplasmas. |