HAMAP logo

HAMAP rule MF_00530

Send feedback

General rule information [?]

Accession MF_00530
Dates 20-JAN-2002 (Created)
17-FEB-2023 (Last updated, Version 57)
Name ATP_synth_epsil_bac
Scope
Bacteria
Plastid
Template P0A6E6 (ATPE_ECOLI)
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

Identifier
ATPE
case <OC:Bacteria>
Protein name
RecName: Full=ATP synthase epsilon chain;
AltName: Full=ATP synthase F1 sector epsilon subunit;
AltName: Full=F-ATPase epsilon subunit;
Gene name
atpC
else case <OG:Chloroplast>
Protein name
RecName: Full=ATP synthase epsilon chain, chloroplastic;
AltName: Full=ATP synthase F1 sector epsilon subunit;
AltName: Full=F-ATPase epsilon subunit;
Gene name
atpE
end case

Comments [?]

Function Produces ATP from ADP in the presence of a proton gradient across the membrane.
Subunit F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
case <OG:Chloroplast>
Subcellular location Plastid, chloroplast thylakoid membrane; Peripheral membrane protein.
else case <OC:Cyanobacteriota> and not <OC:Gloeobacter>
Subcellular location Cellular thylakoid membrane; Peripheral membrane protein.
else case <OC:Gloeobacter>
Subcellular location Cell inner membrane; Peripheral membrane protein.
else case not defined <Property:Membrane> or <Property:Membrane=1>
Subcellular location Cell membrane; Peripheral membrane protein.
else case <Property:Membrane=2>
Subcellular location Cell inner membrane; Peripheral membrane protein.
end case
Similarity Belongs to the ATPase epsilon chain family.

Keywords [?]

ATP synthesis
CF(1)
Transport
Ion transport
Hydrogen ion transport
case <OG:Chloroplast> or <OC:Cyanobacteriota> and not <OC:Gloeobacter>
Thylakoid
else case <OC:Gloeobacter>
Cell membrane
Cell inner membrane
else case not defined <Property:Membrane> or <Property:Membrane=1>
Cell membrane
else case <Property:Membrane=2>
Cell membrane
Cell inner membrane
end case
Membrane

Gene Ontology [?]

GO:0005524; Molecular function: ATP binding.
GO:0046933; Molecular function: proton-transporting ATP synthase activity, rotational mechanism.
GO:0015986; Biological process: proton motive force-driven ATP synthesis.
case <OG:Chloroplast>
GO:0009535; Cellular component: chloroplast thylakoid membrane.
else case <OC:Cyanobacteriota> and not <OC:Gloeobacter>
GO:0042651; Cellular component: thylakoid membrane.
else
GO:0005886; Cellular component: plasma membrane.
end case

Cross-references [?]

Pfam PF00401; ATP-synt_DE; 1;
PF02823; ATP-synt_DE_N; 1;
TIGRFAMs TIGR01216; ATP_synt_epsi; 1;

Additional information [?]

Size range 108-152 amino acids
Related rules None
Fusion None
Comments Divergent CAUVC and CHLLI not shown in alignment. ACEWO and PROMO are sodium-specific; it is not possible to distinguish proton-depedent ATPase subunits from sodium-dependent ones. FRACC and NOVAD are 87 residues long and marked as atypical.


View rule in raw text format (no links)