HAMAP rule MF_00849
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_00849 |
| Accession | MF_00849 |
| Dates | 10-FEB-2020 (Created)
03-SEP-2024 (Last updated, Version 8) |
| Name | BipA |
| Scope(s) |
Bacteria |
| Template(s) | P0DTT0; P0A3B2; H9L427; [ Recover all ] |
| Triggered by |
HAMAP; MF_00849 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | BIPA |
| Protein name | RecName: Full=Large ribosomal subunit assembly factor BipA; EC=3.6.5.-; AltName: Full=GTP-binding protein BipA; |
| Gene name | Name=bipA; |
Comments
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| FUNCTION | A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA. |
| CATALYTIC ACTIVITY | Reaction=GTP + H2O = GDP + phosphate + H(+); Xref=Rhea:RHEA:19669, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:37565, ChEBI:CHEBI:43474, ChEBI:CHEBI:58189; |
| SUBUNIT | Monomer. |
| SUBCELLULAR LOCATION | Cytoplasm. Note=Binds to ribosomes. |
| SIMILARITY | Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily. |
Keywords
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| Cytoplasm |
| GTP-binding |
| Hydrolase |
| Nucleotide-binding |
| Ribosome biogenesis |
| RNA-binding |
| rRNA-binding |
| tRNA-binding |
Gene Ontology
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| GO:0005737; Cellular component:cytoplasm |
| GO:0005525; Molecular function:GTP binding |
| GO:0003924; Molecular function:GTPase activity |
| GO:0043022; Molecular function:ribosome binding |
| GO:0000027; Biological process:ribosomal large subunit assembly |
Cross-references
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| PROSITE | PS00301; G_TR_1; 1; |
| PROSITE | PS51722; G_TR_2; 1; |
| Pfam | PF00679; EFG_C; 1; |
| Pfam | PF00009; GTP_EFTU; 1; |
| Pfam | PF03144; GTP_EFTU_D2; 1; |
| PRINTS | PR00315; ELONGATNFCT; 1; |
| NCBIfam | TIGR00231; small_GTP; 1; |
| NCBIfam | TIGR01394; TypA_BipA; 1; |
Features
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| From: BIPA_ECOLI (P0DTT0) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 15 | 20 | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" |
D-[HA]-G-K-[ST]-[ST] | ||||||||
| BINDING | 128 | 131 | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" |
N-K-[ITV]-D | ||||||||
Additional information
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| Size range | 575-643 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |