HAMAP rule MF_00922
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_00922 |
| Accession | MF_00922 |
| Dates | 25-APR-2012 (Created)
01-JUN-2023 (Last updated, Version 9) |
| Name | OM_assembly_BamD |
| Scope(s) |
Bacteria Pseudomonadota |
| Template(s) | P0AC02; [ Recover all ] |
| Triggered by |
HAMAP; MF_00922 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | BAMD |
| Protein name | RecName: Full=Outer membrane protein assembly factor BamD; |
| Gene name | Name=bamD; |
Comments
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| case <OC:Enterobacterales> and not <OC:Buchnera> | |
| FUNCTION | Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery. |
| SUBUNIT | Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. |
| else | |
| FUNCTION | Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| SUBUNIT | Part of the Bam complex. |
| end case | |
| case <Feature:PS51257> | |
| SUBCELLULAR LOCATION | Cell outer membrane; Lipid-anchor. |
| else | |
| SUBCELLULAR LOCATION | Cell outer membrane. |
| end case | |
| SIMILARITY | Belongs to the BamD family. |
Keywords
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| Cell outer membrane | |
| Membrane | |
| case <Feature:PS51257> | |
| Lipoprotein | |
| Palmitate | |
| end case | |
| Signal | |
Gene Ontology
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| GO:0043165; Biological process:Gram-negative-bacterium-type cell outer membrane assembly |
| GO:0051205; Biological process:protein insertion into membrane |
| GO:0009279; Cellular component:cell outer membrane |
Cross-references
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| PROSITE | PS51257; PROKAR_LIPOPROTEIN; 0-1; |
| PROSITE | PS50005; TPR; 0-4; |
| PROSITE | PS50293; TPR_REGION; 0-1; |
| Pfam | PF07719; TPR_2; 1; |
| NCBIfam | TIGR03302; OM_YfiO; 1; |
| General | Signal; -; 1; |
| REP | Repeat_TPR; TPR; 0-4; |
Features
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Additional information
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| Size range | 200-380 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |