HAMAP rule MF_00922
General rule information
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Accession | MF_00922 |
Dates | 25-APR-2012 (Created)
1-JUN-2023 (Last updated, Version 8) |
Name | OM_assembly_BamD |
Scope(s) |
Bacteria Pseudomonadota |
Template(s) | P0AC02 (BAMD_ECOLI); [ Recover all ] |
Triggered by |
HAMAP; MF_00922 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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Identifier | BAMD |
Protein name | RecName: Full=Outer membrane protein assembly factor BamD; |
Gene name | Name=bamD; |
Comments
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case <OC:Enterobacterales> and not <OC:Buchnera> | |
FUNCTION | Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery. |
SUBUNIT | Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. |
else | |
FUNCTION | Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
SUBUNIT | Part of the Bam complex. |
end case | |
case <Feature:PS51257> | |
SUBCELLULAR LOCATION | Cell outer membrane; Lipid-anchor. |
else | |
SUBCELLULAR LOCATION | Cell outer membrane. |
end case | |
SIMILARITY | Belongs to the BamD family. |
Keywords
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Cell outer membrane | |
Membrane | |
case <Feature:PS51257> | |
Lipoprotein | |
Palmitate | |
end case | |
Signal |
Gene Ontology
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GO:0043165; Biological process:Gram-negative-bacterium-type cell outer membrane assembly |
GO:0051205; Biological process:protein insertion into membrane |
GO:0009279; Cellular component:cell outer membrane |
Cross-references
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PROSITE | PS51257; PROKAR_LIPOPROTEIN; 0-1; |
PROSITE | PS50005; TPR; 0-4; |
PROSITE | PS50293; TPR_REGION; 0-1; |
Pfam | PF07719; TPR_2; 1; |
NCBIfam | TIGR03302; OM_YfiO; 1; |
General | Signal; -; 1; |
REP | Repeat_TPR; TPR; 0-4; |
Features
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Additional information
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Size range | 200-380 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |