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HAMAP rule MF_01100

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General rule information [?]

Accession MF_01100
Dates 16-JUL-2002 (Created)
19-NOV-2022 (Last updated, Version 31)
Name 5DNU
Scope
Bacteria; Gammaproteobacteria
Template P76491 (5DNU_ECOLI)

Propagated annotation [?]


Identifier, protein and gene names [?]

Identifier
5DNU
case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Protein name
RecName: Full=5'-deoxynucleotidase YfbR;
EC 3.1.3.89;
AltName: Full=5'-deoxyribonucleotidase;
AltName: Full=Nucleoside 5'-monophosphate phosphohydrolase;
Gene name
yfbR
end case
case not <OC:Escherichia> and not <OC:Shigella> and not <OC:Salmonella>
Protein name
RecName: Full=5'-deoxynucleotidase ;
EC 3.1.3.89;
AltName: Full=5'-deoxyribonucleotidase;
AltName: Full=Nucleoside 5'-monophosphate phosphohydrolase;
end case

Comments [?]

Function Catalyzes the strictly specific dephosphorylation of 2'-deoxyribonucleoside 5'-monophosphates.
Catalytic activity RHEA:36167: a 2'-deoxyribonucleoside 5'-phosphate + H2O = a 2'-deoxyribonucleoside + phosphate
EC 3.1.3.89
Cofactor a divalent metal cation
Subunit Homodimer.
Subcellular location Cytoplasm.
Similarity Belongs to the 5DNU family.

Keywords [?]


Gene Ontology [?]

GO:0016791; Molecular function: phosphatase activity.

Cross-references [?]

Pfam PF01966; HD; 1;
PF13023; HD_3; 1;
PROSITE PS51831; HD; 1; trigger=PRU01175;

Features [?]

From: 5DNU_ECOLI (P76491)
Key     From     To       Description   Tag   Condition   FTGroup
BINDING     18     19       /ligand="substrate     R-W  
BINDING     77     80       /ligand="substrate     D-x-x-T  
BINDING     33     33       /ligand="a divalent metal cation" /ligand_id="ChEBI:CHEBI:60240     H  
BINDING     68     68       /ligand="a divalent metal cation" /ligand_id="ChEBI:CHEBI:60240     H  
BINDING     69     69       /ligand="a divalent metal cation" /ligand_id="ChEBI:CHEBI:60240     D  
BINDING     137     137       /ligand="a divalent metal cation" /ligand_id="ChEBI:CHEBI:60240     D  
BINDING     33     33       /ligand="substrate     H  
BINDING     69     69       /ligand="substrate     D  
BINDING     137     137       /ligand="substrate     D  
SITE     18     18       Appears to be important in orienting the phosphate for catalysis     R  

Additional information [?]

Size range 194-199 amino acids
Related rules None
Fusion None