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HAMAP rule MF_01310

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General rule information [?]

Accession MF_01310
Dates 26-FEB-2003 (Created)
22-SEP-2023 (Last updated, Version 36)
Name Ribosomal_uS11
Scope(s) Bacteria
Archaea
Plastid
Template(s) P0A7R9 (RS11_ECOLI); P80376 (RS11_THET8); [ Recover all ]
Triggered by
case c? <OC:Bacteria> or <OC:Archaea> or <OG:Chloroplast>
HAMAP; MF_01310 (Get profile general information and statistics)
end case

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier RS11
Protein name RecName: Full=Small ribosomal subunit protein uS11;
Gene name Name=rpsK;
else case <OC:Cyanobacteriota>
Identifier RS11
Protein name RecName: Full=Small ribosomal subunit protein uS11;
Gene name Name=rpsK; Synonyms=rps11;
else case <OC:Archaea>
Identifier RS11
Protein name RecName: Full=Small ribosomal subunit protein uS11;
Gene name Name=rps11;
else case <OG:Chloroplast>
Identifier RR11
Protein name RecName: Full=Small ribosomal subunit protein uS11c;
Gene name Name=rps11;
end case

Comments [?]

case <OC:Bacteria>
FUNCTIONLocated on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome.
SUBUNITPart of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.
end case
case <OC:Archaea>
FUNCTIONLocated on the platform of the 30S subunit.
SUBUNITPart of the 30S ribosomal subunit.
end case
case <OG:Chloroplast>
SUBUNITPart of the 30S ribosomal subunit.
SUBCELLULAR LOCATIONPlastid, chloroplast.
end case
SIMILARITYBelongs to the universal ribosomal protein uS11 family.

Keywords [?]


Gene Ontology [?]

GO:0019843; Molecular function:rRNA binding
GO:0006412; Biological process:translation
case <OG:Chloroplast>
GO:0009507; Cellular component:chloroplast
end case

Cross-references [?]

Pfam PF00411; Ribosomal_S11; 1;
PROSITE PS00054; RIBOSOMAL_S11; 1;
PIRSF PIRSF002131; Ribosomal_S11; 1;
NCBIfam TIGR03628; Arch_S11P; 1;
NCBIfam TIGR03632; Bact_S11; 1;

Features [?]


Additional information [?]

Size range 124-156 amino acids
Related rules None
Fusion Nter: None Cter: None



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