HAMAP logo

HAMAP rule MF_01310

Send feedback

General rule information [?]

Accession MF_01310
Dates 26-FEB-2003 (Created)
1-JUN-2023 (Last updated, Version 35)
Name Ribosomal_S11
Scope
Bacteria
Archaea
Plastid
Templates P0A7R9 (RS11_ECOLI); P80376 (RS11_THET8): [Recover all]
case <OC:Bacteria> or <OC:Archaea> or <OG:Chloroplast>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier
RS11
Protein name
RecName: Full=Small ribosomal subunit protein uS11;
Gene name
rpsK
else case <OC:Cyanobacteriota>
Identifier
RS11
Protein name
RecName: Full=Small ribosomal subunit protein uS11;
Gene name
rpsK, rps11
else case <OC:Archaea>
Identifier
RS11
Protein name
RecName: Full=Small ribosomal subunit protein uS11;
Gene name
rps11
else case <OG:Chloroplast>
Identifier
RR11
Protein name
RecName: Full=Small ribosomal subunit protein uS11c;
Gene name
rps11
end case

Comments [?]

case <OC:Bacteria>
Function Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
Subunit Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.
end case
case <OC:Archaea>
Function Located on the platform of the 30S subunit.
Subunit Part of the 30S ribosomal subunit.
end case
case <OG:Chloroplast>
Subunit Part of the 30S ribosomal subunit.
Subcellular location Plastid, chloroplast.
end case
Similarity Belongs to the universal ribosomal protein uS11 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
RNA-binding
rRNA-binding

Gene Ontology [?]

GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

Pfam PF00411; Ribosomal_S11; 1;
PROSITE PS00054; RIBOSOMAL_S11; 1;
PIRSF PIRSF002131; Ribosomal_S11; 1;
NCBIfam TIGR03628; Arch_S11P; 1;
TIGR03632; Bact_S11; 1;

Additional information [?]

case <OC:Bacteria>
Size range 118-150 amino acids
end case
case <OC:Archaea>
Size range 124-156 amino acids
end case
Related rules None
Fusion None


View rule in raw text format (no links)