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Annotation rule MF_01320
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General rule information [?]

Accession MF_01320
Dates 2-FEB-2004 (Created)
19-NOV-2019 (Last updated, Version 26)
Name Ribosomal_L2
Scope
Bacteria
Archaea
Plastid
Templates Q9RXJ9 (RL2_DEIRA); P20276 (RL2_HALMA); P60422 (RL2_ECOLI): [Recover all]
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by
end case

case <OC:Archaea>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier
RL2
Protein name
RecName: Full=50S ribosomal protein L2;
Gene name
rplB
end case
case <OC:Cyanobacteria>
Identifier
RL2
Protein name
RecName: Full=50S ribosomal protein L2;
Gene name
rplB, rpl2
end case
case <OC:Archaea>
Identifier
RL2
Protein name
RecName: Full=50S ribosomal protein L2;
Gene name
rpl2
end case
case <OG:Chloroplast>
Identifier
RK2
Protein name
RecName: Full=50S ribosomal protein L2, chloroplastic;
Gene name
rpl2
end case

Comments [?]

case not <OG:Chloroplast>
Function One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
Subunit Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.
end case
case <OG:Chloroplast>
Subunit Part of the 50S ribosomal subunit.
Subcellular location Plastid, chloroplast.
end case
Similarity Belongs to the universal ribosomal protein uL2 family.

Keywords [?]

case <FT:1>
Acetylation
end case
Ribonucleoprotein
Ribosomal protein
case not <OG:Chloroplast>
RNA-binding
rRNA-binding
end case

Gene Ontology [?]

GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

Pfam PF00181; Ribosomal_L2; 1;
PF03947; Ribosomal_L2_C; 1;
TIGRFAMs TIGR01171; RplB_bact; 1;
PROSITE PS00467; RIBOSOMAL_L2; 1;

Features [?]

case <OC:Escherichia> or <OC:Shigella>
From: RL2_ECOLI (P60422)
Key     From     To       Description   Tag   Condition   FTGroup
MOD_RES     242     242       N6-acetyllysine     K  
end case

Additional information [?]

Size range 233-304 amino acids
Related rules None
Fusion None
Comments The initiation codon is created by RNA editing in barley and maize, and is suggested to be created by editing in wheat. The same start codon exists in rice (ACG), so we suggest it too is edited.


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