Home  |  Contact
Annotation rule MF_01342
Send feedback

General rule information [?]

Accession MF_01342
Dates 24-NOV-2005 (Created)
19-NOV-2019 (Last updated, Version 19)
Name Ribosomal_L16
Scope
Bacteria
Plastid
Templates Q9RXJ5 (RL16_DEIRA); P0ADY7 (RL16_ECOLI); P60489 (RL16_THET8): [Recover all]
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier
RL16
Protein name
RecName: Full=50S ribosomal protein L16;
Gene name
rplP
else case <OC:Cyanobacteria>
Identifier
RL16
Protein name
RecName: Full=50S ribosomal protein L16;
Gene name
rplP, rpl16
else case <OG:Chloroplast>
Identifier
RK16
Protein name
RecName: Full=50S ribosomal protein L16, chloroplastic;
Gene name
rpl16
end case

Comments [?]

case <OC:Bacteria>
Function Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
end case
Subunit Part of the 50S ribosomal subunit.
case <OG:Chloroplast>
Subcellular location Plastid, chloroplast.
end case
Similarity Belongs to the universal ribosomal protein uL16 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
case <OC:Bacteria>
RNA-binding
rRNA-binding
tRNA-binding
end case

Gene Ontology [?]

case <OC:Bacteria>
GO:0019843; Molecular function: rRNA binding.
end case
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

PROSITE PS00586; RIBOSOMAL_L16_1; 1;
PS00701; RIBOSOMAL_L16_2; 1;
Pfam PF00252; Ribosomal_L16; 1;
PRINTS PR00060; RIBOSOMALL16; 1;
TIGRFAMs TIGR01164; RplP_bact; 1;

Additional information [?]

Size range 133-182 amino acids
Related rules None
Fusion None
Comments CARRP is annotated as atypical due to a weak match against profile.


View rule in raw text format (no links)