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HAMAP rule MF_01343

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General rule information [?]

Accession MF_01343
Dates 6-DEC-2005 (Created)
17-FEB-2023 (Last updated, Version 20)
Name Ribosomal_S15
Scope
Bacteria
Archaea
Plastid
Templates Q5SJ76 (RS15_THET8); P0ADZ4 (RS15_ECOLI); P05766 (RS15_GEOSE); P80378 (RS15_THETH): [Recover all]
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by
end case

case <OC:Archaea>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier
RS15
Protein name
RecName: Full=30S ribosomal protein S15;
Gene name
rpsO
else case <OC:Cyanobacteriota>
Identifier
RS15
Protein name
RecName: Full=30S ribosomal protein S15;
Gene name
rpsO, rps15
else case <OC:Archaea>
Identifier
RS15
Protein name
RecName: Full=30S ribosomal protein S15;
Gene name
rps15
else case <OG:Chloroplast>
Identifier
RR15
Protein name
RecName: Full=30S ribosomal protein S15, chloroplastic;
Gene name
rps15
end case

Comments [?]

case <OC:Bacteria>
Function One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
Subunit Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.
else case <OC:Archaea>
Subunit Part of the 30S ribosomal subunit.
else case <OG:Chloroplast>
Subunit Part of the 30S ribosomal subunit.
Subcellular location Plastid, chloroplast.
end case
Similarity Belongs to the universal ribosomal protein uS15 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
case <OC:Bacteria>
RNA-binding
rRNA-binding
end case

Gene Ontology [?]

case <OC:Bacteria>
GO:0019843; Molecular function: rRNA binding.
end case
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

PROSITE PS00362; RIBOSOMAL_S15; 1;
Pfam PF00312; Ribosomal_S15; 1;
PF08069; Ribosomal_S13_N; 1;
TIGRFAMs TIGR00952; S15_bact; 1;

Additional information [?]

case <OC:Bacteria>
Size range 78-113 amino acids
end case
case <OC:Archaea>
Size range 132-170 amino acids
end case
Related rules None
Fusion None
Comments Sometimes duplicated in (mostly) monocot plastids.


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