HAMAP rule MF_01345
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_01345 |
| Accession | MF_01345 |
| Dates | 20-MAR-2006 (Created)
22-SEP-2023 (Last updated, Version 28) |
| Name | Ribosomal_uS17 |
| Scope(s) |
Bacteria Archaea Plastid |
| Template(s) | P0AG63; P0DOY7; [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_01345_B (Get profile general information and statistics) end case
case c? <OC:Archaea>
HAMAP; MF_01345_A (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
| Identifier | RS17 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS17; |
| Gene name | Name=rpsQ; |
| else case <OC:Cyanobacteriota> | |
| Identifier | RS17 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS17; |
| Gene name | Name=rpsQ; Synonyms=rps17; |
| else case <OC:Archaea> | |
| Identifier | RS17 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS17; |
| Gene name | Name=rps17; |
| else case <OG:Chloroplast> | |
| Identifier | RR17 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS17c; |
| Gene name | Name=rps17; |
| end case | |
Comments
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| FUNCTION | One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. |
| SUBUNIT | Part of the 30S ribosomal subunit. |
| case <OG:Chloroplast> | |
| SUBCELLULAR LOCATION | Plastid, chloroplast. |
| end case | |
| SIMILARITY | Belongs to the universal ribosomal protein uS17 family. |
Keywords
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Gene Ontology
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| GO:0019843; Molecular function:rRNA binding | |
| GO:0006412; Biological process:translation | |
| case <OG:Chloroplast> | |
| GO:0009507; Cellular component:chloroplast | |
| end case | |
Cross-references
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| PROSITE | PS00056; RIBOSOMAL_S17; 1; |
| Pfam | PF00366; Ribosomal_S17; 1; |
| PRINTS | PR00973; RIBOSOMALS17; 1; |
| NCBIfam | TIGR03630; uS17_arch; 0-1; |
| NCBIfam | TIGR03635; uS17_bact; 0-1; |
Features
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Additional information
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| Size range | 106-123 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: <Unknown> |
| Comments | Second copy fused to an unknown domain in METAC. |