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HAMAP rule MF_01345

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General rule information [?]

Accession MF_01345
Dates 20-MAR-2006 (Created)
1-JUN-2023 (Last updated, Version 26)
Name Ribosomal_S17
Scope
Bacteria
Archaea
Plastid
Templates P0AG63 (RS17_ECOLI); P0DOY7 (RS17_THET8): [Recover all]
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by
end case

case <OC:Archaea>
Triggered by
end case


Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier
RS17
Protein name
RecName: Full=Small ribosomal subunit protein uS17;
Gene name
rpsQ
else case <OC:Cyanobacteriota>
Identifier
RS17
Protein name
RecName: Full=Small ribosomal subunit protein uS17;
Gene name
rpsQ, rps17
else case <OC:Archaea>
Identifier
RS17
Protein name
RecName: Full=Small ribosomal subunit protein uS17;
Gene name
rps17
else case <OG:Chloroplast>
Identifier
RR17
Protein name
RecName: Full=Small ribosomal subunit protein uS17c;
Gene name
rps17
end case

Comments [?]

Function One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
Subunit Part of the 30S ribosomal subunit.
case <OG:Chloroplast>
Subcellular location Plastid, chloroplast.
end case
Similarity Belongs to the universal ribosomal protein uS17 family.

Keywords [?]

Ribonucleoprotein
Ribosomal protein
RNA-binding
rRNA-binding

Gene Ontology [?]

GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.
case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case

Cross-references [?]

PROSITE PS00056; RIBOSOMAL_S17; 1;
Pfam PF00366; Ribosomal_S17; 1;
PRINTS PR00973; RIBOSOMALS17; 1;
NCBIfam TIGR03630; uS17_arch; 0-1;
TIGR03635; uS17_bact; 0-1;

Additional information [?]

case <OC:Bacteria>
Size range 76-138 amino acids
end case
case <OC:Archaea>
Size range 106-123 amino acids
end case
Related rules None
Fusion Nter: None; Cter: <Unknown>
Comments Second copy fused to an unknown domain in METAC.


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