HAMAP rule MF_01347
General rule information
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Accession | MF_01347 |
Dates | 18-MAY-2006 (Created) 17-FEB-2023 (Last updated, Version 52) |
Name | ATP_synth_beta_bact |
Scope | Bacteria
Plastid |
Template | P0ABB4 (ATPB_ECOLI) |
case <OC:Bacteria> or <OG:Chloroplast>
Triggered by |
end case
Propagated annotation
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Identifier, protein and gene names
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Identifier |
|
case <OC:Bacteria>
Protein name |
|
else case <OG:Chloroplast>
Protein name |
|
end case
case <OG:Chloroplast>
Gene name |
|
else case <OC:Cyanobacteriota>
Gene name |
|
else
Gene name |
|
end case
Comments
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Function | Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. |
Catalytic activity | RHEA:57720: ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate
EC 7.1.2.2 |
case <OG:Chloroplast> or <Property:PHOTOSYN>
Subunit | F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12). |
else
Subunit | F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains. |
end case
case <OG:Chloroplast>
Subcellular location | Plastid, chloroplast thylakoid membrane; Peripheral membrane protein. |
else case <OC:Cyanobacteriota> and not <OC:Gloeobacter>
Subcellular location | Cellular thylakoid membrane; Peripheral membrane protein. |
else case <OC:Gloeobacter>
Subcellular location | Cell inner membrane; Peripheral membrane protein. |
else case not defined <Property:Membrane> or <Property:Membrane=1>
Subcellular location | Cell membrane; Peripheral membrane protein. |
else case <Property:Membrane=2>
Subcellular location | Cell inner membrane; Peripheral membrane protein. |
end case
Similarity | Belongs to the ATPase alpha/beta chains family. |
Keywords
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ATP synthesis
ATP-binding
CF(1)
Hydrogen ion transport
Ion transport
Nucleotide-binding
Translocase
Transport
Membrane
ATP-binding
CF(1)
Hydrogen ion transport
Ion transport
Nucleotide-binding
Translocase
Transport
Membrane
case <OG:Chloroplast> or <OC:Cyanobacteriota> and not <OC:Gloeobacter>
else case <OC:Gloeobacter>
else case not defined <Property:Membrane> or <Property:Membrane=1>
else case <Property:Membrane=2>
end case
Gene Ontology
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GO:0005524; Molecular function: ATP binding.
GO:0046933; Molecular function: proton-transporting ATP synthase activity, rotational mechanism.
GO:0015986; Biological process: proton motive force-driven ATP synthesis.
GO:0046933; Molecular function: proton-transporting ATP synthase activity, rotational mechanism.
GO:0015986; Biological process: proton motive force-driven ATP synthesis.
case <OC:Cyanobacteriota> and not <OC:Gloeobacter>
GO:0042651; Cellular component: thylakoid membrane.
else case <OG:Chloroplast>
GO:0009535; Cellular component: chloroplast thylakoid membrane.
else
GO:0005886; Cellular component: plasma membrane.
end case
Cross-references
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PROSITE | PS00152; ATPASE_ALPHA_BETA; 1; |
Pfam | PF00006; ATP-synt_ab; 1; |
PF00306; ATP-synt_ab_C; 1; | |
PF02874; ATP-synt_ab_N; 1; | |
TIGRFAMs | TIGR01039; AtpD; 1; |
Features
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From: ATPB_ECOLI (P0ABB4) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
BINDING | 150 | 157 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616 | G-G-A-G-[V,L,C,M]-G-K-[T,S] |
Additional information
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Size range | 447-542 amino acids |
Related rules | None |
Fusion | Nter: <Unknown>; Cter: None |
Comments | Fused with an unknown domain in MALP2. Some of the Rhizobiales have a slightly longer N-terminus. |