HAMAP rule MF_01361
General rule information
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| Accession | MF_01361 |
| Dates | 12-OCT-2006 (Created)
17-FEB-2023 (Last updated, Version 29) |
| Name | UPF0391 |
| Scope(s) |
Bacteria Cyanobacteriota Alphaproteobacteria Betaproteobacteria Deltaproteobacteria Gammaproteobacteria Archaea Halobacteria Methanomicrobia |
| Template(s) | None (); [ Recover all ] |
| Triggered by |
HAMAP; MF_01361 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella> | |
| Identifier | YTJA |
| Protein name | RecName: Full=UPF0391 membrane protein YtjA; |
| Gene name | Name=ytjA; |
| else | |
| Identifier | Ynnn |
| Protein name | RecName: Full=UPF0391 membrane protein |
| end case | |
Comments
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| case <OC:Bacteria> and <Feature:Transmembrane==1> | |
| SUBCELLULAR LOCATION | Cell membrane; Single-pass membrane protein. |
| else case <OC:Bacteria> and <Feature:Transmembrane>1> | |
| SUBCELLULAR LOCATION | Cell membrane; Multi-pass membrane protein. |
| else case <OC:Archaea> and <Feature:Transmembrane==1> | |
| SUBCELLULAR LOCATION | Cell membrane; Single-pass membrane protein. |
| else case <OC:Archaea> and <Feature:Transmembrane>1> | |
| SUBCELLULAR LOCATION | Cell membrane; Multi-pass membrane protein. |
| end case | |
| SIMILARITY | Belongs to the UPF0391 family. |
Keywords
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Gene Ontology
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| GO:0005886; Cellular component:plasma membrane |
Cross-references
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| Pfam | PF07043; DUF1328; 1; |
| General | Transmembrane; -; 2; |
Features
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Additional information
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| Size range | 51-69 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |
| Comments | Some entries have signal sequences; however we have decided to predict 1-2 transmembrane helices. |