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Annotation rule MF_01361
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General rule information [?]

Accession MF_01361
Dates 12-OCT-2006 (Created)
19-NOV-2019 (Last updated, Version 28)
Name UPF0391
Scope
Bacteria; Cyanobacteria
Bacteria; Alphaproteobacteria
Bacteria; Betaproteobacteria
Bacteria; Deltaproteobacteria
Bacteria; Gammaproteobacteria
Archaea; Halobacteria
Archaea; Methanomicrobia
Template None
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Identifier
YTJA
Protein name
RecName: Full=UPF0391 membrane protein YtjA;
Gene name
ytjA
else
Identifier
Ynnn
Protein name
RecName: Full=UPF0391 membrane protein ;
end case

Comments [?]

case <OC:Bacteria> and <Feature:Transmembrane==1>
Subcellular location Cell membrane; Single-pass membrane protein.
else case <OC:Bacteria> and <Feature:Transmembrane>1>
Subcellular location Cell membrane; Multi-pass membrane protein.
else case <OC:Archaea> and <Feature:Transmembrane==1>
Subcellular location Cell membrane; Single-pass membrane protein.
else case <OC:Archaea> and <Feature:Transmembrane>1>
Subcellular location Cell membrane; Multi-pass membrane protein.
end case
Similarity Belongs to the UPF0391 family.

Keywords [?]

Membrane
Cell membrane
Transmembrane
Transmembrane helix

Gene Ontology [?]

GO:0005886; Cellular component: plasma membrane.

Cross-references [?]

Pfam PF07043; DUF1328; 1;

Computed features [?]

General Transmembrane; -; 2; trigger=yes;

Additional information [?]

Size range 51-69 amino acids
Related rules None
Fusion None
Comments Some entries have signal sequences; however we have decided to predict 1-2 transmembrane helices.


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