HAMAP rule MF_01361
General rule information
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| Accession | MF_01361 |
| Dates | 12-OCT-2006 (Created) 17-FEB-2023 (Last updated, Version 29) |
| Name | UPF0391 |
| Scope | Bacteria; Cyanobacteriota
Bacteria; Alphaproteobacteria
Bacteria; Betaproteobacteria
Bacteria; Deltaproteobacteria
Bacteria; Gammaproteobacteria
Archaea; Halobacteria
Archaea; Methanomicrobia |
| Template | None |
| Triggered by |
Propagated annotation
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Identifier, protein and gene names
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case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
| Identifier |
|
| Protein name |
|
||||
| Gene name |
|
else
| Identifier |
|
| Protein name |
|
||||
end case
Comments
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case <OC:Bacteria> and <Feature:Transmembrane==1>
| Subcellular location | Cell membrane; Single-pass membrane protein. |
else case <OC:Bacteria> and <Feature:Transmembrane>1>
| Subcellular location | Cell membrane; Multi-pass membrane protein. |
else case <OC:Archaea> and <Feature:Transmembrane==1>
| Subcellular location | Cell membrane; Single-pass membrane protein. |
else case <OC:Archaea> and <Feature:Transmembrane>1>
| Subcellular location | Cell membrane; Multi-pass membrane protein. |
end case
| Similarity | Belongs to the UPF0391 family. |
Keywords
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Gene Ontology
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GO:0005886; Cellular component: plasma membrane.
Cross-references
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| Pfam | PF07043; DUF1328; 1; |
Computed features
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| General | Transmembrane; -; 2; trigger=yes; |
Additional information
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| Size range | 51-69 amino acids |
| Related rules | None |
| Fusion | None |
| Comments | Some entries have signal sequences; however we have decided to predict 1-2 transmembrane helices. |