HAMAP logo

HAMAP rule MF_01361

Send feedback

General rule information [?]

Accession MF_01361
Dates 12-OCT-2006 (Created)
29-NOV-2023 (Last updated, Version 32)
Name UPF0391
Scope(s) Bacteria
Cyanobacteriota
Alphaproteobacteria
Betaproteobacteria
Deltaproteobacteria
Gammaproteobacteria
Archaea
Halobacteria
Methanomicrobia
Template(s) None (); [ Recover all ]
Triggered by HAMAP; MF_01361 (Get profile general information and statistics)

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Escherichia> or <OC:Shigella> or <OC:Salmonella>
Identifier YTJA
Protein name RecName: Full=UPF0391 membrane protein YtjA;
Gene name Name=ytjA;
else
Identifier Ynnn
Protein name RecName: Full=UPF0391 membrane protein ;
end case

Comments [?]

case <OC:Bacteria> and <Feature:Transmembrane==1>
SUBCELLULAR LOCATIONCell membrane; Single-pass membrane protein.
else case <OC:Bacteria> and <Feature:Transmembrane>1>
SUBCELLULAR LOCATIONCell membrane; Multi-pass membrane protein.
else case <OC:Archaea> and <Feature:Transmembrane==1>
SUBCELLULAR LOCATIONCell membrane; Single-pass membrane protein.
else case <OC:Archaea> and <Feature:Transmembrane>1>
SUBCELLULAR LOCATIONCell membrane; Multi-pass membrane protein.
end case
SIMILARITYBelongs to the UPF0391 family.

Keywords [?]


Gene Ontology [?]

GO:0005886; Cellular component:plasma membrane

Cross-references [?]

Pfam PF07043; DUF1328; 1;
General Transmembrane; -; 2;

Features [?]


Additional information [?]

Size range 51-69 amino acids
Related rules None
Fusion Nter: None Cter: None
Comments Some entries have signal sequences; however we have decided to predict 1-2 transmembrane helices.



View rule in raw text format (no links)