HAMAP rule MF_01366
General rule information
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| Accession | MF_01366 |
| Dates | 10-NOV-2006 (Created)
1-JUN-2023 (Last updated, Version 21) |
| Name | Ribosomal_L13 |
| Scope(s) |
Bacteria Archaea Plastid |
| Template(s) | P0AA10 (RL13_ECOLI); Q9RXY1 (RL13_DEIRA); P60488 (RL13_THET8); P29198 (RL13_HALMA); [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria> or <OC:Archaea> or <OG:Chloroplast>
HAMAP; MF_01366 (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
| Identifier | RL13 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL13; |
| Gene name | Name=rplM; |
| else case <OC:Cyanobacteriota> | |
| Identifier | RL13 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL13; |
| Gene name | Name=rplM; Synonyms=rpl13; |
| else case <OC:Archaea> | |
| Identifier | RL13 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL13; |
| Gene name | Name=rpl13; |
| else case <OG:Chloroplast> | |
| Identifier | RK13 |
| Protein name | RecName: Full=Large ribosomal subunit protein uL13c; |
| Gene name | Name=rpl13; |
| end case | |
Comments
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| case not <OG:Chloroplast> | |
| FUNCTION | This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. |
| SUBUNIT | Part of the 50S ribosomal subunit. |
| else | |
| SUBUNIT | Part of the 50S ribosomal subunit. |
| SUBCELLULAR LOCATION | Plastid, chloroplast. |
| end case | |
| SIMILARITY | Belongs to the universal ribosomal protein uL13 family. |
Keywords
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Gene Ontology
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| GO:0006412; Biological process:translation | |
| case <OG:Chloroplast> | |
| GO:0009507; Cellular component:chloroplast | |
| end case | |
Cross-references
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| PROSITE | PS00783; RIBOSOMAL_L13; 1; |
| Pfam | PF00572; Ribosomal_L13; 1; |
| NCBIfam | TIGR01066; RplM_bact; 1; |
| NCBIfam | TIGR01077; L13_A_E; 1; |
Features
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Additional information
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| Size range | 136-187 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: MF_00532 (rpsI) |
| Comments | rpl13p is fused with rps9p in METTH |