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HAMAP rule MF_01366

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General rule information [?]

Accession MF_01366
Dates 10-NOV-2006 (Created)
22-SEP-2023 (Last updated, Version 22)
Name Ribosomal_uL13
Scope(s) Bacteria
Archaea
Plastid
Template(s) P0AA10 (RL13_ECOLI); Q9RXY1 (RL13_DEIRA); P60488 (RL13_THET8); P29198 (RL13_HALMA); [ Recover all ]
Triggered by
case c? <OC:Bacteria> or <OC:Archaea> or <OG:Chloroplast>
HAMAP; MF_01366 (Get profile general information and statistics)
end case

Propagated annotation [?]

Identifier, protein and gene names [?]

case <OC:Bacteria> and not <OC:Cyanobacteriota>
Identifier RL13
Protein name RecName: Full=Large ribosomal subunit protein uL13;
Gene name Name=rplM;
else case <OC:Cyanobacteriota>
Identifier RL13
Protein name RecName: Full=Large ribosomal subunit protein uL13;
Gene name Name=rplM; Synonyms=rpl13;
else case <OC:Archaea>
Identifier RL13
Protein name RecName: Full=Large ribosomal subunit protein uL13;
Gene name Name=rpl13;
else case <OG:Chloroplast>
Identifier RK13
Protein name RecName: Full=Large ribosomal subunit protein uL13c;
Gene name Name=rpl13;
end case

Comments [?]

case not <OG:Chloroplast>
FUNCTIONThis protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
SUBUNITPart of the 50S ribosomal subunit.
else
SUBUNITPart of the 50S ribosomal subunit.
SUBCELLULAR LOCATIONPlastid, chloroplast.
end case
SIMILARITYBelongs to the universal ribosomal protein uL13 family.

Keywords [?]


Gene Ontology [?]

GO:0006412; Biological process:translation
case <OG:Chloroplast>
GO:0009507; Cellular component:chloroplast
end case

Cross-references [?]

PROSITE PS00783; RIBOSOMAL_L13; 1;
Pfam PF00572; Ribosomal_L13; 1;
NCBIfam TIGR01066; RplM_bact; 1;
NCBIfam TIGR01077; L13_A_E; 1;

Features [?]


Additional information [?]

Size range 136-187 amino acids
Related rules None
Fusion Nter: None Cter: MF_00532 (rpsI)
Comments rpl13p is fused with rps9p in METTH



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