HAMAP rule MF_01371
General rule information
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| Accession | MF_01371 |
| Dates | 8-JAN-2007 (Created)
14-MAY-2024 (Last updated, Version 21) |
| Name | Ribosomal_uL30 |
| Scope(s) |
Bacteria Acidobacteriota Actinomycetota Aquificia Bacteroidota Chlorobiota Chloroflexota Deinococcota Bacillota Fusobacteriota Pseudomonadota Spirochaetota Thermotogae Archaea |
| Template(s) | Q9RSL0 (RL30_DEIRA); P0AG51 (RL30_ECOLI); Q5SHQ6 (RL30_THET8); P14121 (RL30_HALMA); [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria>
HAMAP; MF_01371_B (Get profile general information and statistics) end case
case c? <OC:Archaea>
HAMAP; MF_01371_A (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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| Identifier | RL30 |
| case <OC:Bacteria> | |
| Protein name | RecName: Full=Large ribosomal subunit protein uL30; |
| Gene name | Name=rpmD; |
| else case <OC:Archaea> | |
| Protein name | RecName: Full=Large ribosomal subunit protein uL30; |
| Gene name | Name=rpl30; |
| end case | |
Comments
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| SUBUNIT | Part of the 50S ribosomal subunit. |
| SIMILARITY | Belongs to the universal ribosomal protein uL30 family. |
Keywords
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Gene Ontology
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| GO:0006412; Biological process:translation |
Cross-references
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| PROSITE | PS00634; RIBOSOMAL_L30; 1; |
| Pfam | PF00327; Ribosomal_L30; 1; |
| NCBIfam | TIGR01308; RpmD_bact; 1; |
| NCBIfam | TIGR01309; L30P_arch; 1; |
Features
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Additional information
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| Size range | 149-185 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: <Unknown> |
| Comments | Fused with an unknown region in AQUAE. N-terminal extension in RUTMC not taken into account for size range. CENSY, METS5 and NITMS considered atypical. Missing from spinach chloroplast ribosomes, and from Chlamydiota, Cyanobacteriota and Planctomycetes. |