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Annotation rule MF_01463 |
General rule information
[?]
Accession |
MF_01463 |
Dates |
5-JUL-2011 (Created) 19-NOV-2019 (Last updated, Version 7) |
case <OC:Bacteria>
end case
case <OC:Archaea>
end case
Propagated annotation
[?]
Identifier, protein and gene names
[?]
case <OC:Bacteria>
Protein name |
RecName:
|
Full=Protein translocase subunit SecD;
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|
else case <OC:Archaea>
Protein name |
RecName:
|
Full=Protein-export membrane protein SecD;
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|
end case
case <OC:Bacteria>
Function |
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. |
else case <OC:Archaea>
Function |
Involved in protein export. |
end case
case <OC:Cyanobacteria> and not <OC:Gloeobacter>
Function |
Probably participates in protein translocation into and across both the cytoplasmic and thylakoid membranes in cyanobacterial cells. |
end case
case <OC:Proteobacteria>
Subunit |
Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC. |
else case <OC:Bacteria>
Subunit |
Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved. |
else case <OC:Archaea>
Subunit |
Part of the protein translocation apparatus. Forms a complex with SecF. |
end case
case not defined <Property:Membrane> or <Property:Membrane=1>
Subcellular location |
Cell membrane; Multi-pass membrane protein. |
else case <Property:Membrane=2>
Subcellular location |
Cell inner membrane; Multi-pass membrane protein. |
end case
Similarity |
Belongs to the SecD/SecF family. SecD subfamily. |
case defined <Property:Membrane> and <Property:Membrane=2>
end case
GO:0065002; Biological process: intracellular protein transmembrane transport.
GO:0006605; Biological process: protein targeting.
case <OC:Bacteria>
GO:0043952; Biological process: protein transport by the Sec complex.
end case
General |
Transmembrane; -; 6; trigger=yes; |
Additional information
[?]
case <OC:Bacteria>
Size range |
380-695 amino acids |
end case
case <OC:Archaea>
Size range |
385-570 amino acids |
end case
Related rules |
MF_01464 (SECF) |
Fusion |
Nter: None; Cter: MF_01464 (SecF) |
Comments |
Often found as a SecDF fusion protein. In bacteria the operon consists of secDF. Some archaea have a secFD operon, in others the genes are separated on the genome. |