HAMAP rule MF_01479
General rule information
[?]
| PURL | https://purl.expasy.org/hamap/rule/MF_01479 |
| Accession | MF_01479 |
| Dates | 08-OCT-2012 (Created)
13-JAN-2023 (Last updated, Version 17) |
| Name | WhiB |
| Scope(s) |
Bacteria Actinomycetota |
| Template(s) | P9WF43; P9WF41; P9WF39; Q7AKI9; [ Recover all ] |
| Triggered by |
HAMAP; MF_01479 (Get profile general information and statistics) |
Propagated annotation
[?]
Identifier, protein and gene names
[?]
| Identifier | WHIB |
| Protein name | RecName: Full=Transcriptional regulator WhiB; |
| Gene name | Name=whiB; |
Comments
[?]
| FUNCTION | Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. |
| COFACTOR | Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Note=Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.; |
| SUBCELLULAR LOCATION | Cytoplasm. |
| PTM | The Fe-S cluster can be nitrosylated by nitric oxide (NO). |
| PTM | Upon Fe-S cluster removal intramolecular disulfide bonds are formed. |
| SIMILARITY | Belongs to the WhiB family. |
Keywords
[?]
| case <FTGroup:1> | |
| 4Fe-4S | |
| Iron | |
| Iron-sulfur | |
| Metal-binding | |
| end case | |
| Cytoplasm | |
| Disulfide bond | |
| DNA-binding | |
| Transcription | |
| Transcription regulation | |
Gene Ontology
[?]
| GO:0051539; Molecular function:4 iron, 4 sulfur cluster binding |
| GO:0005737; Cellular component:cytoplasm |
| GO:0006355; Biological process:regulation of DNA-templated transcription |
| GO:0003677; Molecular function:DNA binding |
| GO:0035731; Molecular function:dinitrosyl-iron complex binding |
Cross-references
[?]
| Pfam | PF02467; Whib; 1; |
Features
[?]
| From: WHIB1_MYCTU (P9WF43) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 9 | 9 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
| BINDING | 37 | 37 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
| BINDING | 40 | 40 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
| BINDING | 46 | 46 | /ligand="[4Fe-4S] cluster" /ligand_id="ChEBI:CHEBI:49883" |
C | 1 | |||||||
Additional information
[?]
| Size range | 76-306 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |